Halorubrum salinarum: HPS36_02235
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Entry
HPS36_02235 CDS
T07841
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
hsai
Halorubrum salinarum
Pathway
hsai03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hsai00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
HPS36_02235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsai03021
]
HPS36_02235
03019 Messenger RNA biogenesis [BR:
hsai03019
]
HPS36_02235
Transcription machinery [BR:
hsai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
HPS36_02235
RNA polymerase I system
HPS36_02235
Messenger RNA biogenesis [BR:
hsai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
HPS36_02235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
DUF6093
KOW2_Spt5
KOW4_SPT5
SH3_KIN17_C
Ribosomal_uL24m-like
Motif
Other DBs
NCBI-ProteinID:
QKG91719
UniProt:
A0A7D4CR56
LinkDB
All DBs
Position
419567..420019
Genome browser
AA seq
150 aa
AA seq
DB search
MPIYSVKTTASQERTVADMIAEKEAPEIQAVIAPDQLTSYVMVEATDGTAFGRILDEIPH
ARGVIQGGDGPAESPFSEVEHFLSPTPDVEGIGEGDIVELIAGPFKGEKARVQRIDEGKD
QVTVELYEATVPIPVTVRGDQIRVLDSEER
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgccgatctactcggtcaagacgacggcgagccaggagcggacggtcgccgacatgatc
gccgagaaggaggcgccggagatccaggccgtcatcgccccggaccagctcacgagctac
gtgatggtcgaggcgaccgacgggaccgccttcgggcggatcctcgacgagatcccgcac
gcccgcggcgtcattcagggcggcgacggccccgccgagagccccttctccgaggtcgag
cacttcctctcgccgaccccggacgtggaggggatcggcgagggcgacatcgtcgagctg
atcgcgggcccgttcaagggtgagaaggcgcgcgtccagcggatcgacgaggggaaagac
caggtgacagtcgagctgtacgaggcgaccgtgccgatcccggtgacggtccgcggcgac
cagatccgcgtgctcgacagcgaggaacggtaa
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