Halorubrum salinarum: HPS36_03520
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Entry
HPS36_03520 CDS
T07841
Name
(GenBank) transcription initiation factor IIB 3
KO
K03124
transcription initiation factor TFIIB
Organism
hsai
Halorubrum salinarum
Pathway
hsai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HPS36_03520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsai03021
]
HPS36_03520
Transcription machinery [BR:
hsai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HPS36_03520
Prokaryotic type
Archaeal type
TFB
HPS36_03520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QKG91963
UniProt:
A0A7D4CXX2
LinkDB
All DBs
Position
673601..674422
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AA seq
273 aa
AA seq
DB search
MLRSWTSLTTDTNIKLYTPNDTGDEDSRVGPASTNLLHDKGLSTMIGWQNTDAKGNALSG
EQRQQMRRLRRWDERFRRRSSADRNLMYALGEINRMASALGAPDSTRETAGVIYRRALTD
GLVTGRAVESVATAALYAASRMDGVPRSTDEVSAVSRVEQIRVERAYRHVSRELGLEIAP
TDPRSFIGRIASDVECTDATEREARRLAGIAVENGVHSGKHPVGIAAGALYAAAKRCDES
LRQTDIADATDVSEMTIRNRYPEILAATDTEDE
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgatcatggacttctttgacaacggatacgaacatcaaactgtacacgccgaac
gacaccggcgatgaggactcccgcgtcggaccagcaagcacgaacctcttacacgataag
gggttgtcgacgatgattgggtggcaaaacacagatgcgaaggggaacgcgctgtcagga
gaacagcgacaacagatgcgtcgcctccgacggtgggatgagcgcttccgacggcgctca
tctgcggataggaatcttatgtatgcactcggtgagatcaaccgcatggcttccgcgctt
ggtgcgccggacagcacccgagagacagcaggcgtcatctatcgtcgcgcacttacggac
ggactcgttacgggtcgagccgttgaaagcgtcgccactgcggcgctatacgcggcgagt
cgcatggacggtgtcccgcgctctaccgacgaggtctcggcagtgagccgcgtcgaacaa
attcgcgttgagcgggcatatcgacacgtctcacgtgaactcgggttagaaatcgccccg
acagacccccgttcgttcatcggacggatcgcgtcggacgtggagtgtacggacgcgaca
gagcgagaggcacgacgtctcgccggaatagcggttgaaaacggcgttcacagcgggaaa
catccggtaggcatcgccgctggggcattgtacgcggccgctaagcgatgcgatgagtcg
ctccgacagacagatatcgctgatgctacggacgtgagcgagatgacgatacggaaccgg
tatcctgagattttggccgcaacagataccgaggatgagtag
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