Halorubrum salinarum: HPS36_04720
Help
Entry
HPS36_04720 CDS
T07841
Name
(GenBank) topoisomerase DNA-binding C4 zinc finger domain-containing protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hsai
Halorubrum salinarum
Brite
KEGG Orthology (KO) [BR:
hsai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsai03032
]
HPS36_04720
03400 DNA repair and recombination proteins [BR:
hsai03400
]
HPS36_04720
Enzymes [BR:
hsai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPS36_04720
DNA replication proteins [BR:
hsai03032
]
Prokaryotic type
DNA Topoisomerases
HPS36_04720
DNA repair and recombination proteins [BR:
hsai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPS36_04720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
HHH
DNA_pol_lambd_f
Cdd1
Zn_ribbon_PaaD
DUF4332
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QKG92179
UniProt:
A0A7D4CS54
LinkDB
All DBs
Position
complement(921555..924152)
Genome browser
AA seq
865 aa
AA seq
DB search
MSRGPELIITEKDNAARRIADILSGESATAERMNDVNVYEWGGKRCIGLSGHVVGVDFPA
EYNDWRDVEPVELIDAPVTKTPTQEGIVAALRRLARNASRVVIATDYDREGELIGKEAYE
LVREVNEDVPVDRVRFSSITENEVKKAFANPDDLDFELAAAGEARQTIDLTWGAALTRFL
SLSARQMGDDFISVGRVQGPTLKLIVDREREIQAFDPESYWELTGELAKSGGDPFEARYF
YLNDEGNERERVWDEAVADTLTEALAAAEAATVDDVDRRTQTDDPPTPFNTTAFIRAAGS
LGYSAQRAMSLAEDLYTAGYVTYPRTDNTVYPDDLEPEELIEELSAASTFGADTASLLDG
DGDIEPTEGDEETTDHPPIHPTGELPSASDLSDDEWEVYELIVRRFLATCADPATWERLR
VVALANGEATPIAADADGLAALRDPEDAAGPADLVADGGLRLKANGKRLLEAGYHDVYPY
RSSDERIVPDVEVGETLSLSDRATEAKETQPPRRYGQSRLIEEMEKRQLGTKATRHRTIE
KLYDRNYVESDPPRPTRLAEAVVEAAEEFADRIVSEEMTAQLERDMAAIAAGEKDYDEVT
ADSRELLSRVFDDLTESREAVGDHLQTSLKADKTLGPCPECGSDLLVRKSRQGSYFVGCD
GYPDCEYTLPLPSTGKPLLLDETCEDHDLRHVKMLAGRKTFVHGCPQCKADEADEQEDEV
IGLCPDCGEEHGGELAIKRLRSGSRLVGCTRYPDCDYSLPLPRRGEIEVTDETCEEHDLP
HLRVHSGDDPWELGCPICNYREFTARQEGSELQTVEGIGEKTAEKLKDAGVGGVDDLKSA
DPDDLAADVDGVGADTVRDWQAKAD
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcggccccgagctgatcatcacggagaaagacaacgcggcgcggcgcatcgcc
gacatcctgagcggcgagtccgcgaccgcggagcggatgaacgacgtcaacgtctacgag
tggggcggcaagcggtgtatcgggctctccggccacgtcgtcggcgtcgactttccggcc
gagtacaacgactggcgcgacgtggagccggtcgagctgatcgacgcgcccgtcacgaag
acgccgacgcaggaggggatcgtcgccgcgctgcgccggctcgcccgcaacgcctcccgc
gtcgtcatcgcgaccgactacgaccgcgagggcgagctgatcggcaaggaggcgtacgag
ctcgtccgcgaggtcaacgaggacgtgcccgtcgaccgcgtgcgcttctcgtcgatcacg
gaaaacgaggtgaaaaaggcgttcgcgaaccccgacgacctcgacttcgagctggcggcc
gccggggaggcccgccagaccatcgacctcacgtggggcgcggccctgacccgcttcctc
tcgctgtccgcccgacagatgggcgacgacttcatctccgtcggccgggtccaggggccg
acgctcaagctcatcgtcgaccgcgagcgcgagatccaggcgttcgaccccgagtcctac
tgggagctgacgggcgagctggcgaagtcgggcggcgacccgttcgaggcgcgctacttc
tacctgaacgacgagggcaacgagcgcgagcgcgtctgggacgaggcggtcgccgacacg
ctcaccgaggcgctcgccgcggccgaggcggcgaccgtcgacgacgtcgaccgccgcacg
cagaccgacgacccgccgacgccgttcaacaccaccgcgttcatccgcgcggcggggtcg
ctcggctactccgcgcagcgcgccatgtcgctcgcggaggacctctacaccgccggctac
gtcacctacccccggaccgacaacacggtgtacccggacgacttggagcccgaggagctg
atcgaggagctgtcggcggcctcgacgttcggcgcggacaccgcgagcctgctcgacggc
gacggcgacatcgagccgaccgagggcgacgaggagacgacggaccacccgccgatccac
ccgaccggcgagctcccctcggcgtcggacctctccgacgacgagtgggaggtgtacgag
ctcatcgtccgccggttcctcgccacctgcgccgacccggccacctgggagcggctgcgc
gtggtcgcgctcgcgaacggcgaggcgacgccgatcgccgccgacgcggacgggctcgcc
gcgctccgcgaccccgaggacgcggccgggccggccgacctcgtcgcggacggcgggctg
cggctgaaggccaacgggaagcggctgctcgaggccggctaccacgacgtgtacccgtac
cgctccagcgacgagcggatcgtgccggacgtcgaggtcggcgagacgctgtcgctgtcg
gaccgggccaccgaggccaaggagacgcagccgccccggcgctacgggcagtcgcggctc
atcgaggagatggagaagcgacagttggggacgaaggcgacccgccaccggacgatcgag
aagctgtacgaccgcaactacgtcgagagcgacccgccgcgaccgacccggctcgccgag
gcggtcgtcgaggccgccgaggagttcgccgaccggatcgtgagcgaggagatgaccgcc
cagctcgaacgcgacatggcggccatcgccgcgggcgagaaggactacgacgaggtgacg
gcggactcccgcgagctgctctcgcgcgtgttcgacgacctcaccgagtcgcgagaggcg
gtcggtgaccacctccagacgtcgctgaaggccgacaagacgctcgggccctgtccggag
tgcggctcggacctgctcgtccggaagtcgcggcaggggtcgtacttcgtcggctgcgac
ggctaccccgactgcgagtacacgctcccgctcccctcgaccgggaagccgctcctcctc
gacgagacctgcgaggaccacgacctccgccacgtgaagatgctcgccgggcggaagacg
ttcgtccacggctgcccgcagtgtaaggcggacgaggccgacgagcaggaggacgaggtg
atcggcctctgtcccgactgcggcgaggaacacgggggcgagctcgcgatcaagcggctc
cgctccggctcgcggctcgtcggctgtacgcgctaccccgactgcgactactcgctgccg
ctcccgcggcgcggcgagatcgaggtaaccgacgagacctgcgaggagcacgacctcccg
cacctccgcgtccactccggcgacgacccctgggagctgggctgccccatctgtaactac
cgcgagttcacggcccgccaggagggctcggagctgcagaccgtcgaggggatcggcgag
aagaccgccgagaagctcaaggacgccggcgtcggcggcgtcgacgacctcaagtccgcc
gacccggacgacctcgcggccgacgtcgacggcgtcggcgccgacaccgtccgcgactgg
caggcgaaggcggactga
DBGET
integrated database retrieval system
