Halorubrum salinarum: HPS36_06230
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Entry
HPS36_06230 CDS
T07841
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
hsai
Halorubrum salinarum
Pathway
hsai03030
DNA replication
hsai03420
Nucleotide excision repair
hsai03430
Mismatch repair
hsai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPS36_06230
03420 Nucleotide excision repair
HPS36_06230
03430 Mismatch repair
HPS36_06230
03440 Homologous recombination
HPS36_06230
03460 Fanconi anemia pathway
HPS36_06230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsai03000
]
HPS36_06230
03032 DNA replication proteins [BR:
hsai03032
]
HPS36_06230
03400 DNA repair and recombination proteins [BR:
hsai03400
]
HPS36_06230
Transcription factors [BR:
hsai03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
HPS36_06230
DNA replication proteins [BR:
hsai03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
HPS36_06230
DNA repair and recombination proteins [BR:
hsai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
HPS36_06230
MMR (mismatch excision repair)
HPS36_06230
DSBR (double strand breaks repair)
HR (homologous recombination)
HPS36_06230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_MEIOB_N
OB_Ssb-like
RADX
Motif
Other DBs
NCBI-ProteinID:
QKG92464
UniProt:
A0A7D3XUZ3
LinkDB
All DBs
Position
complement(1235477..1236940)
Genome browser
AA seq
487 aa
AA seq
DB search
MGAIEEVYEDLDTEVEFEEFEAAVEDKVEQMGGLADEETAAMLIAHELRDEEADTIADIE
PGMNEVKFLGKVTAIGEVRTFERDDDEAEEGRVCNVDVADASGSVRVALWDDMAAAAEEE
LEVGQVLRVMGRPKEGYSGLEVSADKVEPDEDAEVDVQVLDTYRVEDLTLGASDVDLVGQ
VLDTDSIRTFDRDDGSEGRVANLTVGDETGRVRVTLWDGKADLAEEFDPGEVVEVGDGYV
RERDGDLELHVGDRGTVERVDEDVEYVPETTDIADLEIGQTVDVGGGVIETDPKRTFDRD
DGSEGQVRNVRIKDETGEIRVALWGDKADREIELADRVVFTDVEIQDGWQDDLEASANWR
STVSVLEGESDAADAAGGGRSGGDRDADETGLGAFAEDGQKAAAEAVAGEGGEDEASGAG
GAAAATAEQSGEAVEFTGTVVQTGDPVVLDDGQRTKTVETDASLRLGEEITVRGPERDGT
IDADDVF
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgggagccatagaagaggtgtacgaggacctcgacaccgaggtcgagttcgaggagttc
gaggccgcggtcgaggacaaggtcgagcagatgggcgggcttgccgacgaggagaccgcc
gcgatgctcatcgcgcacgagctgcgcgacgaggaggccgacaccatcgccgacatcgaa
ccggggatgaacgaggtgaaattcctcgggaaggtgaccgccatcggcgaggtccggacc
ttcgagcgcgacgacgacgaggccgaggagggccgggtgtgtaacgtcgacgtcgcggac
gcctccggatccgtccgggtcgcgctgtgggacgacatggccgcggccgccgaggaggag
ttggaggtcgggcaggtcctccgcgtcatgggccgccccaaggaggggtacagcgggctc
gaagtgagcgcggacaaggtcgaaccggacgaggacgccgaggtcgacgtccaggtgctc
gacacctaccgcgtggaggatctcacgctcggcgcgtccgacgtcgacctcgtcggccag
gtgctcgacaccgactcgatccggacgttcgaccgcgacgacggcagcgaggggcgcgtg
gcgaacctcaccgtcggcgacgagacggggcgcgtccgcgtcacgctgtgggacgggaag
gccgacctcgccgaggagttcgaccccggcgaggtcgtcgaggtcggcgacggctacgtc
cgcgagcgcgacggcgacttagagctccacgtcggcgaccgcgggaccgtcgagcgcgtc
gacgaggacgtggagtacgtgcccgagacgaccgacatcgccgatctggagatcggacag
accgtcgacgtcggcggcggcgtcatcgagacggacccgaagcggacgttcgaccgcgac
gacggcagcgaggggcaggtccgcaacgtccggatcaaagacgagacgggcgagatccgc
gtcgcgctgtggggcgacaaggccgaccgcgagatcgaactggccgaccgcgtcgtcttc
accgacgtggagatccaagacggctggcaggacgacctggaggcgtccgcgaactggcgc
tcgaccgtctcggtcctcgagggagagagcgacgcggcggatgccgccgggggcggacgc
tcgggcggcgaccgcgacgccgacgagaccgggctcggcgccttcgccgaggacggacag
aaggcggccgcggaggccgtggccggcgagggcggcgaggacgaggcgagcggcgcgggc
ggcgccgcggccgcgacggcggagcagtcgggcgaggcggtggagttcaccgggacggtc
gtccagacgggcgacccggtcgtcctcgacgacggccagcggacgaagacggtcgagacc
gacgcgagcctccgcctcggcgaggagataaccgtccgggggccggagcgggacggcacc
atcgacgccgacgacgtcttctga
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integrated database retrieval system
