Halorubrum salinarum: HPS36_06380
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Entry
HPS36_06380 CDS
T07841
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hsai
Halorubrum salinarum
Pathway
hsai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HPS36_06380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsai03021
]
HPS36_06380
Transcription machinery [BR:
hsai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HPS36_06380
Prokaryotic type
Archaeal type
TFB
HPS36_06380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_Crp_2
Zn_ribbon_NUD
Cas12f1-like_TNB
Zn_ribbon_3
DZR
HTH_3
RB_B
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
QKG92491
UniProt:
A0A7D4BBK0
LinkDB
All DBs
Position
1266699..1267703
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AA seq
334 aa
AA seq
DB search
MSDARSTRVRSPRTETDDAATTDRAATADRAAVAERSPTGDESRTADEAGDRETCPECGG
RTRVEDAERVCADCGLVVEADRIDHGPEWRSFDDEDTDPKRTGAPLTRSRHDRGLSTEIG
RSTKVKGRKRRRLARMRTQHNRAQISTKRDRNKVYAYTEIRRLTGVLELPDSVRDSACAL
FDSAQEESLLRGRSLEGFAAACVYVACRTADVARTVGEVCAEAKATEAEHRAAFDAMNRE
LGLPIAPSGPAEYLPRFASDLGCDPAVERRAGELAERAVEEGIANGRNPVGVAAACLYTA
ARELDAECTQQEAADAAGVTPVTVRRTYVDLTEE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgcacgctctacccgcgttcgttcgccccggaccgagaccgacgacgccgcg
acgacggaccgcgcggcgaccgccgaccgcgccgccgtcgcggagcggagcccgaccggc
gacgagagccggacggccgacgaggccggcgaccgcgagacgtgcccggagtgcggcggc
cgcacgcgcgtcgaggacgcggagcgcgtctgcgccgactgcgggctggtcgtcgaggcc
gaccggatcgaccacggccccgagtggcggtcgttcgacgacgaggacacggacccgaaa
cgcaccggcgccccgctgacgcggtcgcgccacgaccgcggcctctcgacggagatcggt
cggtcgacgaaggtgaaggggcgcaagcgccggcggctcgcccggatgcggacccagcac
aaccgcgcgcagatctcgacgaagcgcgaccgcaacaaggtgtacgcctacaccgagatc
cgccggctcaccggcgtcttggagctgcccgacagcgtccgcgacagcgcctgcgcgctg
ttcgactccgcacaggaggagagcctgctccgcggccgctcgctcgaggggttcgccgcg
gcctgcgtctacgtcgcctgccgcaccgccgacgtggcccgcaccgtcggcgaggtgtgc
gccgaggcgaaggcgacggaggccgagcaccgggccgccttcgacgcgatgaaccgcgag
ctcggcctccccatcgcgccgagcggccccgcggagtacctcccgcggttcgccagcgac
ctcggctgcgacccggccgtcgagcgccgcgccggcgagctggccgagcgcgccgtcgag
gaggggatcgcgaacggccgcaacccggtcggcgtcgcggccgcctgcctctacaccgcg
gcccgcgagctcgacgccgagtgtacccagcaggaggccgccgacgcggccggcgtgacg
ccggtgaccgtccggcggacgtacgtcgacctgacggaggagtga
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