Halorubrum salinarum: HPS36_07405
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Entry
HPS36_07405 CDS
T07841
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hsai
Halorubrum salinarum
Pathway
hsai03022
Basal transcription factors
hsai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HPS36_07405
09124 Replication and repair
03420 Nucleotide excision repair
HPS36_07405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsai03021
]
HPS36_07405
03036 Chromosome and associated proteins [BR:
hsai03036
]
HPS36_07405
03400 DNA repair and recombination proteins [BR:
hsai03400
]
HPS36_07405
Enzymes [BR:
hsai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HPS36_07405
Transcription machinery [BR:
hsai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HPS36_07405
Chromosome and associated proteins [BR:
hsai03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HPS36_07405
DNA repair and recombination proteins [BR:
hsai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HPS36_07405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
SLFN-g3_helicase
ATPase
Zot
nSTAND3
DUF6594
GvpD_P-loop
AAA_30
AAA_25
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKG92681
UniProt:
A0A7D4CKQ5
LinkDB
All DBs
Position
1474257..1476473
Genome browser
AA seq
738 aa
AA seq
DB search
MSESPHLRFFPYEEPYPNQREAMDRVANALDRGQDVLFEGAPGTGKTLSALVPALEHARE
HDRTVVITTNVHQQMRQFVEDARAITREEPIRAVVFKGKSSMCHIDVDYQECQTLRDTTR
EMVETESDVRELESRQRELLAESREGDAGAAEAREAIMDELDELEAELDEYEAANVCEHY
RNNLTRDTDEFFGWLFEDVRTPEDVYAYADERELCGYELLKEGMEGVDLVVCNYHHLLDP
NIREQFFRWIDRDPSEIITVFDEAHNIEDAARDHATRTLTENTLDAALDELADSDDSRAE
PAENVLRAFRDALVETYEDGLGFGGVDENWEDVSIANDDRRDDLTLAFLRNYEGRGIDTE
AELAVQLGQAIDEEYERRYRDGEATTRSESQTLAAARFVATWMDEGAEFGQYPVVSVRRD
AGTDEVYGRAELYTCIPRNVTGELFDEVAASVLMSATLRPFDVTEDVLGLEDAASMAYEM
GYPEANRRTFAADVPPLFASDRNDPETQAAVSSLLRDAIRFTPGNTLAFFPSYAEAERYH
ERLTGPGGAASGAAARGSGGAGAADLGPVYLDGPGEDEERLRSEFVESDGAALFTSLWGT
LGEGVSFDGDDARTVVVVGVPYPHLSDRTQAVQDAYDRAFADRDRARDPGWTYAVEIPTI
RKTRQALGRVIRGPDDFGVRILADRRYTTADMGKYSVRSAFPPEEREELLDVDPTKLKFA
MLNFYQDHDAYDGQPPSP
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagagtcgccgcacctgcggttcttcccgtacgaggagccctacccgaaccagcgc
gaggcgatggacagggtcgccaacgcgctggaccgggggcaggacgtgctgttcgagggc
gcgcccgggacgggcaagacgctctccgcgctcgtgcccgccctggaacacgcccgcgag
cacgaccgcacggtcgtcatcacgaccaacgtccaccagcagatgcggcagttcgtcgag
gacgcccgcgccatcacccgcgaggaacccatccgcgcggtcgtcttcaaggggaagtcg
tcgatgtgccacatcgacgtcgactaccaagagtgtcagaccctccgggacaccacccgc
gagatggtcgagacggagtcggacgtccgcgaactggagtcgcgacagcgcgagctgtta
gccgagagccgcgagggcgacgcgggcgccgcggaggcccgcgaggcgatcatggacgag
ctcgacgagcttgaggccgagctcgacgagtacgaggccgcgaacgtctgcgaacactac
cggaacaacctcacccgcgacaccgacgagttcttcgggtggctgttcgaggacgtccga
acgcccgaggacgtgtacgcgtacgccgacgagcgcgagctgtgcggctacgagctgctg
aaggaggggatggagggcgtcgacctcgtcgtctgtaactaccaccacctcctcgacccg
aacatccgcgagcagttcttccggtggatcgaccgcgacccgagcgagataatcaccgtc
ttcgacgaggcgcacaacatcgaggacgccgcgcgcgaccacgccacccggacgctgacc
gagaacaccctcgacgccgcgctcgacgagctggccgacagcgacgactcccgcgcggag
cccgcggagaacgtcctccgcgccttccgcgacgccctcgtcgagacctacgaggacggg
ctcgggttcggcggggtcgacgagaactgggaggacgtctcgatcgccaacgacgaccgc
cgcgacgacctcacgctggcgttcctccgcaactacgaggggcgggggatagacaccgag
gccgagctcgccgtccagctcggccaggcgatagacgaggagtacgagcgccgctaccgc
gacggggaggcgacgacccgctcggagtcgcagacgctcgcggccgcccggttcgtcgcg
acgtggatggacgagggcgcggagttcggccagtacccggtggtctccgtccggcgcgac
gcgggcaccgacgaggtgtacgggcgcgcggagctgtacacctgtatcccgcggaacgtc
accggcgagctgttcgacgaggtggccgcctcggtcctgatgagcgcgacgctgcgcccg
ttcgacgtgaccgaggacgtgctggggctggaggacgccgcgtcgatggcctacgagatg
ggctaccccgaggcgaaccgccggacgttcgccgccgacgtgccgccgcttttcgcctcg
gaccgcaacgacccggagacccaggcggcggtgtcgtcgctgctccgcgacgcgatccgg
ttcaccccgggcaacacgctcgccttcttcccctcgtacgcggaggccgagcgctaccac
gagcggctcaccggcccgggcggcgcggcgtccggcgccgccgcccggggctccggcggg
gcgggcgcggccgacctcggccccgtctacctcgacggcccgggcgaggacgaggagcgg
ctccgcagcgagttcgtcgagagcgacggcgccgcgctgttcacgtcgctgtgggggacg
ctcggcgagggggtgagcttcgacggcgacgacgcccgcacggtcgtcgtcgtgggcgtc
ccgtacccgcacctctcggaccgcacccaggccgttcaggacgcctacgaccgggcgttc
gcggaccgcgaccgcgcccgcgacccggggtggacctacgcggtcgagatcccgacgatc
cgcaagacccgacaggcgctcgggcgagtgatccgcggccccgacgacttcggggtgcgg
atcctcgcggaccgccgctacacgaccgccgacatggggaagtactcggtccggtccgcg
ttcccgcccgaggagcgcgaggagctgctcgacgtcgacccgacgaagctgaagttcgcg
atgctgaacttctaccaggaccacgacgcctacgacggccagccgccgtcgccgtga
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integrated database retrieval system
