Halorubrum salinarum: HPS36_07925
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Entry
HPS36_07925 CDS
T07841
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hsai
Halorubrum salinarum
Pathway
hsai03410
Base excision repair
hsai03430
Mismatch repair
hsai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPS36_07925
03430 Mismatch repair
HPS36_07925
03440 Homologous recombination
HPS36_07925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsai03400
]
HPS36_07925
DNA repair and recombination proteins [BR:
hsai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HPS36_07925
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPS36_07925
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HPS36_07925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
DUF6003
Motif
Other DBs
NCBI-ProteinID:
QKG92781
UniProt:
A0A7D4CKV0
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All DBs
Position
1582871..1584289
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AA seq
472 aa
AA seq
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MAVAAPVPDLADRATDCADRLREAGRVLLASHIDADGITSAAVASTALARAGIDHEVVFE
KQLDADAIAGIAAREFDVVLFTDFGSGQLDVIADHEARGDFVPVIADHHQPADRDTRYHL
NPLLEGIDGASELSGAGASYVLARALEGPDGDNRDLAALAVVGAVGDMQDSDGGLVGANE
SIVADGVDAGVLEAQTDLDLYGRQTRPLPKFLEYASDVKIPGVSNDEAGAISFLTDLDVD
VKRDGEWRRWVDLDGGERRTLASALMRRAVASGVPSDRIEALVGTAYTLVDEEPGTELRD
VSEFSTLLNATARYERGDVGLAVCLGDRGDALAEARRLLRTHRQNLSEGLQWVKNEGVTH
EEHLQWFDAGSRIRETIVGIVAGMAVGSPAVDRSKPVIAFAEESATELKVSSRGSHALVR
RGLDLSAVMREASQAVGGDGGGHDVAAGATIPTDERDAFLAEADRIVGEQLS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgccgccccagtccccgacctcgccgaccgcgcgaccgactgcgccgaccga
ctgcgcgaggccggccgggtgctgctcgcgtcgcacatcgacgccgacgggatcacgagc
gccgcggtcgcctcgaccgcgctcgcccgggccgggatcgaccacgaggtcgtcttcgag
aagcagctggacgccgacgcgatcgccggcatcgccgcccgcgagttcgacgtggtgctg
ttcaccgacttcggatccggccagctcgacgtgatcgccgaccacgaggcgcgcggcgac
ttcgtccccgtcatcgccgaccaccaccagccggccgaccgcgacacgcgctaccacctc
aaccccctgttggaggggatcgacggcgcgagcgagctctccggcgccggcgcgagctac
gtcctcgcccgcgcgctggagggcccggacggtgacaaccgcgacctcgccgcgctcgcg
gtcgtcggcgcggtcggcgacatgcaagactccgacggcggactcgtcggcgccaacgag
tcgatcgtcgccgacggcgtcgacgccggcgtcctggaggcccagaccgacctcgacctg
tacggcagacagacccgcccgctccccaagttccttgagtacgcctcggacgtgaagatc
ccgggggtctcgaacgacgaggcgggcgcgatatccttcctcaccgacctcgacgtcgac
gtgaaacgcgacggcgagtggcggcgctgggtcgacctcgacggcggggagcggcggacc
ctcgcgtcggcgctgatgcgccgcgcggtcgcctccggcgtcccgtccgaccggatcgag
gcgctcgtcggcaccgcctacacgctggtcgacgaggagcccggcaccgagctgcgcgac
gtcagcgagttctcgaccctgctcaacgccaccgcgcgctacgagcgcggcgacgtgggc
ctggcggtgtgtctcggcgaccgcggcgacgcgctcgcggaggcgcgccggctgctgcgc
acgcaccgacagaacctctccgaggggctccagtgggtcaaaaacgagggcgtcacccac
gaggagcacctccagtggttcgacgccggctcccgcatccgcgagaccatcgtcggcatc
gtcgccgggatggcggtcggctcccccgcggtcgaccgctcgaagccggtgatcgccttc
gccgaggagagcgcgacggagctgaaggtgtcctcgcgcggctcgcacgcgctcgtccga
cgggggctcgacctgtccgcggtgatgcgcgaggcgagtcaggcggtcggcggcgacggc
gggggccacgacgtggccgcgggcgcgacgatcccgaccgacgagcgcgacgcgttcctc
gccgaggcggaccggatcgtcggcgagcagctctcctga
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