Halorubrum salinarum: HPS36_08500
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Entry
HPS36_08500 CDS
T07841
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hsai
Halorubrum salinarum
Pathway
hsai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HPS36_08500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsai03019
]
HPS36_08500
03009 Ribosome biogenesis [BR:
hsai03009
]
HPS36_08500
04131 Membrane trafficking [BR:
hsai04131
]
HPS36_08500
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsai04147
]
HPS36_08500
Messenger RNA biogenesis [BR:
hsai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HPS36_08500
Ribosome biogenesis [BR:
hsai03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HPS36_08500
Membrane trafficking [BR:
hsai04131
]
SNARE
SNARE associated proteins
Others
HPS36_08500
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HPS36_08500
Exosome [BR:
hsai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HPS36_08500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
TIP49
AAA_5
AAA_33
AAA_14
AAA_22
NPHP3_N
nSTAND3
AAA_28
RNA_helicase
AAA_7
Mg_chelatase
NB-ARC
AAA_lid_PRS2_C
AAA_3
IstB_IS21
DUF815
ABC_tran
Sigma54_activat
AAA_18
Parvo_NS1
SLFN-g3_helicase
AAA_17
Zeta_toxin
TsaE
AAA_30
AAA_11
AAA_24
PhoH
AAA_19
bpMoxR
ATPase_2
Vps4_C
Zot
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
QKG92892
UniProt:
A0A7D3Y0Q7
LinkDB
All DBs
Position
complement(1683878..1686145)
Genome browser
AA seq
755 aa
AA seq
DB search
MKLTVKPLKQKDAGRRLAAIDRVAAEELGLSGGDIVRVEGGDGAAIARVWPGYPEDDGTG
VIRIDGRLRQEADVGIDDRVTVEDVDVSRADAVTIAFPSQLRVRGQIAPFIRDKLSGQPV
TEGQTIRTSLGFGLMGGQSQAVPMKIAETSPGGTVVITDETDISISEISAEEIADRGDTA
GGTGEGPDVTYEDIGGLDDELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKT
LIAKAVANEIDANFHTISGPEIMSKYYGESEEQLREVFEEASEESPAIIFMDELDSIAPK
REEAGGDVERRVVAQLLSLMDGLEERGEVVVIGATNRVDAIDQALRRGGRFDREIEVGVP
DRDGRKEILQVHTRNMPLTEGVDLDEYAENTHGFVGADLESLAKESAMHALRRIRPEIDL
ESDEIDADVLNSIQVTEADFKEAMKGIEPSALREVFVEVPDVSWDQVGGLEDTKERLRET
IQWPLEYPEVFEELDMEAAKGVLMYGPPGTGKTLLAKAVANESESNFISIKGPELLNKYV
GESEKGVREVFSKARENAPTIVFFDEIDSIATERGKNSGDSGVGERVVSQLLTELDGLES
LEDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDETARRRIFEVHTRNKPLADDVDLD
ALARRTEGYVGADIEAVAREASMNASREFIGSVTPEEVGESVGNVRVTMAHFEDALREVN
PSVTPETRERYEEIEQRFKRSEVDRDEAEPGAAFQ
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaccgtcaagccgctgaaacagaaggacgccggtcgccgcctcgcggcgatc
gaccgcgtcgcggccgaggagctcgggctctccggcggggacatcgtccgcgtcgagggc
ggcgacggggccgcgatcgcccgcgtctggcccggctaccccgaggacgacggcaccggc
gtgatccgcatcgacggccgcctccggcaggaggccgacgtggggatcgacgaccgcgtc
accgtcgaggacgtcgacgtctcgcgggcggacgcggtgacgatcgccttcccgagccag
ctgcgggtgcggggacagatcgccccgttcatccgcgacaagctctccggacagcccgtc
accgaggggcagacgatccggacctccctcggcttcgggctgatgggcggtcagtcgcag
gcggtcccgatgaagatcgccgagacgagccccggcggcacggtcgtcatcaccgacgag
accgacatctcgatctcggagatatccgccgaggagatcgccgaccgcggcgacaccgcc
ggcggcaccggcgagggccccgacgtcacctacgaggacatcggcgggctcgacgacgag
ctcgaacaggtccgcgagatgatcgagctgcccatgcggcaccccgagctgttcaagcgg
ctcggcatcgacccgccgaagggcgtcctgctccacggcccgccgggcacggggaagacg
ctgatcgcgaaggcggtcgccaacgagatcgacgcgaacttccacacgatctccggcccg
gagatcatgtcgaagtactacggcgagagcgaagagcagctccgcgaggtgttcgaggag
gcgtccgaggagtcgccggcgatcatcttcatggacgagctggactccatcgcgcccaag
cgcgaggaggccggcggcgacgtggagcgccgcgtcgtggcccagctcctctcgctgatg
gacgggctcgaggagcgcggcgaggtcgtcgtcatcggggcgacgaaccgcgtcgacgcc
atcgaccaggcgctccgccggggcggccgcttcgaccgcgagatcgaggtcggcgtcccc
gaccgcgacggccgcaaggagatcctccaggtccacacgcggaacatgccgctgaccgag
ggggtcgacttagacgagtacgccgagaacacccacggcttcgtcggggccgacctggag
tcgctcgcgaaggagtccgcgatgcacgcgctgcggcgcatccgcccggagatcgacctc
gagagcgacgagatcgacgccgacgtgctgaacagcatccaggtgaccgaggcggacttc
aaggaggcgatgaagggcatcgagccctccgcgctccgcgaggtgttcgtcgaggtcccg
gacgtcagctgggaccaggtcggcgggctcgaagacactaaagagcggctccgcgagacg
atccagtggccgctggagtaccccgaggtgttcgaggagcttgacatggaggccgccaag
ggcgtcctgatgtacggcccgccgggcacggggaagaccctgctcgcgaaggcggtcgcc
aacgagagcgagtcgaacttcatctcgatcaaggggccggagctgctgaacaagtacgtg
ggcgagtccgagaagggcgtccgcgaggtgttcagcaaggcccgggagaacgcgccgacg
atcgtgttcttcgacgagatcgactcgatcgccaccgagcgcgggaagaactccggcgac
tccggcgtcggcgagcgcgtcgtctcccagctgctgacggagctcgacgggctcgaatcg
ctggaggacgtggtcgtcatcgcgacgacgaaccgcccggacctcatcgactcggcgctg
ctgcgcccggggcggctggaccggcacgtccacgtgcccgtccccgacgagacggcgcgc
cgccggatcttcgaggtccacacgcggaacaagccgctggcggacgacgtcgacctcgac
gcgctggcgcgcaggaccgagggctacgtgggcgccgatatcgaggcggtcgcccgcgag
gcgtcgatgaacgcctcccgggagttcatcggcagcgtcacccctgaggaggtcggcgag
tccgtcggcaacgtccgcgtgacgatggcccacttcgaggacgcgctgcgcgaggtgaac
ccgagcgtcacccccgagacgcgcgagcgctacgaggagatagaacagcggttcaagcgg
tcggaggtcgaccgcgacgaggccgagccgggcgccgcgttccagtaa
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