KEGG   Halorubrum salinarum: HPS36_09630
Entry
HPS36_09630       CDS       T07841                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
hsai  Halorubrum salinarum
Pathway
hsai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hsai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HPS36_09630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsai03019]
    HPS36_09630
Messenger RNA biogenesis [BR:hsai03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HPS36_09630
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1 RMMBL PDEase_II
Other DBs
NCBI-ProteinID: QKG94157
UniProt: A0A7D4BRX2
LinkDB
Position
1893144..1894496
AA seq 450 aa
MEIEIATLGGYEEVGRQMTAVRAGEDIVIFDMGLNLSKVLIHDNVETESMHSLDLIDMGA
IPDDRVMSELEGDVQAIVPTHGHLDHIAGIPKLAHRYDAPIVSAPYTIELVRQQIEDEGK
FQVDNDLVKMKPGATMAIGDSEQVELEFVNVTHSIIDAINPVLHTPEGAVVYGLDKRLDH
DPVIGDPIDMDRFREIGRQDEGVLAYIEDCTNAGRKGRTPSESYAKKHVEDTLKSMEDYT
GGIVATTFSSHIARVKTLVEYAREIGRQPVLLGRSMEKYSGTAERLDFVDFQGDVGMYGH
RKSVDRAFKRIMKEGKGNFLPIVTGHQGEPRAMLTRMGRGETPYEIDDGDKIVFSASVIP
EPTNEGQRYQSEQLLRMQGARLYDDIHVSGHLREEGHYEMLQALQPQHLIPGHQTLEGRS
PYVDLATSQGYKLGRDVHVTQNGSTIQLVE
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggaaatcgaaattgcgacactcggcggttacgaagaggtcggtcgacagatgacggcg
gtccgcgcgggcgaggacatcgtcatcttcgacatgggcctgaacctcagtaaggtcctc
atccacgacaacgtggagaccgagagcatgcacagcctcgacctgatcgacatgggcgcc
atcccggacgaccgggtcatgagcgaactggagggcgacgttcaggcgatcgtccccacc
cacgggcacctcgaccacatcgcggggatcccgaagctcgcccaccgctacgacgccccc
atcgtctcggcgccgtacacgatcgagctggtccgccagcagatcgaagacgagggcaag
ttccaggtcgacaacgacctcgtgaagatgaagccgggcgccacgatggcgatcggcgac
tccgagcaggtcgaactggagttcgtcaacgtcacccactcgatcatcgacgcgatcaac
ccggtcctccacacgcccgagggggcggtcgtctacggcctcgacaagcgcctggaccac
gaccccgtcatcggcgacccgatcgacatggaccggttccgcgagatcggccgccaggac
gagggtgtcctcgcgtacatcgaggactgtacgaacgccggccggaagggtcggaccccc
tccgagtcgtacgcgaagaagcacgtcgaggacacgctgaagtcgatggaggactacacc
ggcggcatcgtcgccaccacgttctcctcccacatcgcccgcgtgaagaccctcgtcgag
tacgcccgcgagatcggccgccagccggtcctgctcgggcgctcgatggagaagtactcc
ggcacggccgagcggctcgacttcgtcgacttccagggcgacgtcggcatgtacggccac
cggaagtcggtcgaccgcgcgttcaagcgcatcatgaaggaggggaagggcaacttcctc
cccatcgtcaccggccaccaaggcgagccccgcgcgatgctcacccgcatgggccgcggc
gagacgccgtacgaaatcgacgacggcgacaagatcgtcttcagcgccagcgtcatcccg
gagcccaccaacgagggccagcgctaccagagcgaacagctgctccggatgcagggcgcg
cgcctctacgacgacatccacgtctccggccacctccgcgaggagggccactacgagatg
ctgcaggcgctccagccccagcacctcatcccgggccaccagacgctggagggccgctcg
ccgtacgtcgacctcgcgacctcgcaggggtacaagctcggacgtgacgtgcacgtcacg
cagaacgggtccaccatccagctcgtcgaatga

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