Halorubrum salinarum: HPS36_09630
Help
Entry
HPS36_09630 CDS
T07841
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hsai
Halorubrum salinarum
Pathway
hsai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPS36_09630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsai03019
]
HPS36_09630
Messenger RNA biogenesis [BR:
hsai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HPS36_09630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
RMMBL
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QKG94157
UniProt:
A0A7D4BRX2
LinkDB
All DBs
Position
1893144..1894496
Genome browser
AA seq
450 aa
AA seq
DB search
MEIEIATLGGYEEVGRQMTAVRAGEDIVIFDMGLNLSKVLIHDNVETESMHSLDLIDMGA
IPDDRVMSELEGDVQAIVPTHGHLDHIAGIPKLAHRYDAPIVSAPYTIELVRQQIEDEGK
FQVDNDLVKMKPGATMAIGDSEQVELEFVNVTHSIIDAINPVLHTPEGAVVYGLDKRLDH
DPVIGDPIDMDRFREIGRQDEGVLAYIEDCTNAGRKGRTPSESYAKKHVEDTLKSMEDYT
GGIVATTFSSHIARVKTLVEYAREIGRQPVLLGRSMEKYSGTAERLDFVDFQGDVGMYGH
RKSVDRAFKRIMKEGKGNFLPIVTGHQGEPRAMLTRMGRGETPYEIDDGDKIVFSASVIP
EPTNEGQRYQSEQLLRMQGARLYDDIHVSGHLREEGHYEMLQALQPQHLIPGHQTLEGRS
PYVDLATSQGYKLGRDVHVTQNGSTIQLVE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaaattgcgacactcggcggttacgaagaggtcggtcgacagatgacggcg
gtccgcgcgggcgaggacatcgtcatcttcgacatgggcctgaacctcagtaaggtcctc
atccacgacaacgtggagaccgagagcatgcacagcctcgacctgatcgacatgggcgcc
atcccggacgaccgggtcatgagcgaactggagggcgacgttcaggcgatcgtccccacc
cacgggcacctcgaccacatcgcggggatcccgaagctcgcccaccgctacgacgccccc
atcgtctcggcgccgtacacgatcgagctggtccgccagcagatcgaagacgagggcaag
ttccaggtcgacaacgacctcgtgaagatgaagccgggcgccacgatggcgatcggcgac
tccgagcaggtcgaactggagttcgtcaacgtcacccactcgatcatcgacgcgatcaac
ccggtcctccacacgcccgagggggcggtcgtctacggcctcgacaagcgcctggaccac
gaccccgtcatcggcgacccgatcgacatggaccggttccgcgagatcggccgccaggac
gagggtgtcctcgcgtacatcgaggactgtacgaacgccggccggaagggtcggaccccc
tccgagtcgtacgcgaagaagcacgtcgaggacacgctgaagtcgatggaggactacacc
ggcggcatcgtcgccaccacgttctcctcccacatcgcccgcgtgaagaccctcgtcgag
tacgcccgcgagatcggccgccagccggtcctgctcgggcgctcgatggagaagtactcc
ggcacggccgagcggctcgacttcgtcgacttccagggcgacgtcggcatgtacggccac
cggaagtcggtcgaccgcgcgttcaagcgcatcatgaaggaggggaagggcaacttcctc
cccatcgtcaccggccaccaaggcgagccccgcgcgatgctcacccgcatgggccgcggc
gagacgccgtacgaaatcgacgacggcgacaagatcgtcttcagcgccagcgtcatcccg
gagcccaccaacgagggccagcgctaccagagcgaacagctgctccggatgcagggcgcg
cgcctctacgacgacatccacgtctccggccacctccgcgaggagggccactacgagatg
ctgcaggcgctccagccccagcacctcatcccgggccaccagacgctggagggccgctcg
ccgtacgtcgacctcgcgacctcgcaggggtacaagctcggacgtgacgtgcacgtcacg
cagaacgggtccaccatccagctcgtcgaatga
DBGET
integrated database retrieval system