Halorubrum salinarum: HPS36_10450
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Entry
HPS36_10450 CDS
T07841
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hsai
Halorubrum salinarum
Brite
KEGG Orthology (KO) [BR:
hsai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsai03016
]
HPS36_10450 (endA)
Enzymes [BR:
hsai01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HPS36_10450 (endA)
Transfer RNA biogenesis [BR:
hsai03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HPS36_10450 (endA)
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GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
QKG93265
UniProt:
A0A7D3YB08
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Position
complement(2045610..2046764)
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AA seq
384 aa
AA seq
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MQPTGHLRGDAVRVGGDARQRFYDARGYGRPLDGNEIALSRVEAAHLLFRGDLSGIELGG
DGSAGTDADPVGFERFFVASAAAADRFAVRFLVYSDLRDRGFYLSPAREPWPGGRDAASD
AVDFVAYERGETPDTGNVKYPIQVVGERESVAAAGLAGRTLAVVDEESDITYFAAEGGAI
DGATGYEPPTGLSGVLLADRVVVWDAPEGLYDRGFYGRPLTGRAADVEGALQLSLVEAAS
LAADGCLSLSASVGSPEVADADSGDAAARIVARGRDVEGERFDRRLAVYRRLRAADAVPK
TGFKFGADFRTYLDVETVEDLPHSEHLVRVVGPGHEFSPRELSLDVRLAGGVRKEMVFAL
TEVGDGPPADGADVEWLAVDRLTP
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgaccggccacctgcggggcgacgcggtccgcgtcggcggggacgcccgccag
cgcttctacgacgcccgggggtacgggcgaccgctcgacggcaacgagatcgcgctctcg
cgggtcgaggccgcccacctgctgttccgcggcgacctctcggggatcgaactcggcggc
gacgggagcgccgggaccgacgccgacccggtcggcttcgagcgcttcttcgtcgcgagc
gccgccgcggccgaccgcttcgcggtgcggttcctcgtctactcggacctccgcgaccgc
ggcttctacctctcgcccgcacgcgagccgtggcccggcgggcgcgacgcggcgagcgac
gcggtcgacttcgtcgcctacgagcgcggcgagaccccggacacggggaacgtgaagtac
ccgatccaggtcgtcggcgagcgcgagtcggtcgcggccgccgggctcgcggggcgcacg
ctcgcggtcgtcgacgaggagtcggacatcacctacttcgcggcggaggggggcgcgatc
gacggcgcgaccgggtacgagccgccgacgggcctgagcggcgtcctcctcgcggaccgc
gtcgtggtctgggacgcccccgaggggctgtacgaccgcgggttctacggacgcccgctc
accggtcgcgccgccgacgtcgagggcgcgctccagctctcactcgtcgaggccgcgtcg
ctggccgccgacgggtgcctgtcgctgtcggcgtcggtcgggagccccgaggtcgcggac
gcggactcgggggacgccgccgcccggatcgtcgcccgcggccgcgacgtggagggcgag
cgcttcgaccgccggctcgccgtctaccggcgcctccgcgcggccgacgcggtgccgaag
accgggttcaagttcggcgccgacttccggacgtacctcgacgtggagacggtcgaggac
ctcccgcactccgaacacctcgtgcgcgtggtggggccgggtcacgagttctcgccccgg
gaactctcgctcgacgtgcggctcgcgggcggcgtccgcaaggagatggtgttcgcgctg
accgaggtcggcgacgggcctcccgccgacggcgccgacgtggagtggctcgccgtcgac
cggctgacgccctga
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