Halorubrum salinarum: HPS36_11820
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Entry
HPS36_11820 CDS
T07841
Name
(GenBank) DEAD/DEAH box helicase family protein
Organism
hsai
Halorubrum salinarum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNH_repeat
ResIII
CarboxypepD_reg
DEAD
Helicase_C
MG4
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QKG93517
UniProt:
A0A7D4BR81
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All DBs
Position
complement(2305840..2310948)
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AA seq
1702 aa
AA seq
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MDPFKNQVDDRTSYTDLDEQFYDARLAKDSLTQGDWPSQIDRAAIDVTYGVALGTTDSAF
DQGATIGRMDFGTACGPHYVDGLRALAGTQSDLPQLISEHDASDIGDLAFRLNELRVELT
KLGLDDSEIGDLNRATEALIEKLITQHGDETLSRQPLQQPEAVADLLYQLFSDPAVTNYA
EILIDSITADTGNSIGGDSLLTHLDRPQMVTPLWDHQRRAITNWVANGTTGYVNMATATG
KTVLGLAAIAHLFGDLHPTDTADIPAATRSPTGRATVLIVAGQDLLLEQWQSEFDEHLNI
PRSRTETDSDGDRRIELAWGDIEFRTAQELLAADPGLHYDLVILDEAHRYSSGRRDSRGW
RDLFDDLTTNADSVLAMSGSIDDEWLGDSGVKDALEANLAQCIEFGITEAREQNVIADFR
WDVCYAASNSGDTLSGVADSTTTLTPAYDTDTHKFTPQELTGDVPATVPDTFETLRDLRS
FAQSKDGKDARDQSESFDTFATAAFSRRPKRWQLNPPHNTIRQLLTEHVPDRKAVVLVQS
YAQADAVSEHLADWFDADTVYTPAKDEAAPYDTIAAFKQADAGVLVGPGDVLGVGVDLPD
AGIAVNLAKGGVNASLIQRIGRILRNPTGDKHAHFYHVVTIPGEADARLPGEDGRRLLRR
AAEFRALGSRFREHPGFVAVTDTTSHILCELETAGARATIADNRDTSDMVDDDVARTLLD
ELIDEISLTLDDTRDQPVLTTYWQPESLTPGAMPVHDSVTQPKSTDQSEDTSDTTPTDIT
VTVTDTNDSPIGNAVVIAETTTDSTESITDADGTVTITPPTSGSDRSLFVSRAGYQNQTS
ELPSENNTVTITLPDATHTVLTAHADEDSDSDDTETDSEDEHAESVQPDVDELCAEIQRV
DGVLAGYPTLEDMDTHSRYAPARYMDVFESWTDALHAADIDPDQRVIDDVQRVADTVDGV
PTISDITTHSHYTPATLGEHFGSFDAAIAAAGVHDQDQSSPSSPDTDTDSAKTGSASTTQ
NTSEPAETTSTSSTVSDTEAPATDTPTETSTRDKLISELQALATDWDNINRKLLYSVGSH
HPDEYEEVFGSLDAALVEAGVADPDTVKTVIAAQSTLTDKQNELIGELQDLADEWDTIDR
KLLYSVGSHHPDEYDDAFGSVDAALVEAGLADTDATGDDAAVSTDETSTDTTSTATTEKQ
PQSVDSSTTAEIPSNELAELYVAFDRFQHLLTELADKLDTDGTTPMERWAEAVADHWGED
GPDGAPNYGTQQRDRNDFSINDYRDAHGDGDRVTDFHHVEFAAVNDRIQHLLGDAIEDWD
HAVPVTPKSNTPLPVAITSTDALNTAFELLDEFPAYPDADRPTPDDTKMDTDGPILPDGR
VDTLTVTVLDRDQNPGSKRDARLQVALTDGTEVPLDIWSTHDLSLDWTVGDTYTIEQARH
KSWETSTGTGHELSSTKDFHATPTDTGSAGNTPDINLPSQAGTDTNSTSERSRDASTSGA
KSASSSGRSQSSSSGTPSRGDLLDAIQRVGETIDRPLKAGDVSDTTAYSVNDVTRVFGSW
QNALDSAGIDNKARLIDDLHRIAHKLGHRPTTTEMNEHGHVSATTYATYFGTYTAAIEQA
FDETEATATRSSTEVDTTDRSKSAKTDPETSTATDATVTELDTEGGNQEGASDHDDTVTN
SDKGIISDIMNDFDELSDSGSE
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggatccgttcaaaaatcaggtcgatgatcgcacttcgtacacggatcttgacgagcag
ttctacgacgcgcggctcgccaaagactcgttgacgcaaggcgactggccgtcacaaatc
gaccgggccgcgatcgatgtcacgtacggggtcgcgctcggaaccactgattcggcgttc
gatcagggggcgacgattggccgcatggacttcggtaccgcgtgcggcccgcactacgtt
gacgggttgcgagcgcttgcagggacacagtcagacctgccgcagctcattagcgagcac
gacgcaagcgatatcggggatttggccttccgactgaacgagctgcgcgtcgaactcacg
aaactcgggttagacgacagcgaaatcggtgatctcaaccgcgcaaccgaggcgctcatc
gagaaactcatcacgcaacacggcgacgagacgttatcccgccaaccgctacagcaaccg
gaagccgtcgctgacctgctgtatcaactgttctccgacccggctgtgacgaactacgca
gagattctcatcgactcaatcaccgcagacaccggaaacagcatcggcggggacagcctg
ttaacacacctcgatagaccgcaaatggtgacgccgctgtgggatcatcagcgacgcgcc
atcacgaactgggttgccaacgggacgaccgggtacgtgaacatggcgaccgccaccggg
aaaaccgtgctcggcctcgccgccatcgcacacctgttcggtgacttacaccctaccgat
acggctgacatcccggcagcaacacggtcaccgaccggacgcgcaaccgtgcttatcgtc
gccggacaggatttactcctcgaacagtggcaaagcgaattcgacgaacacctgaacatc
ccgcggagccgcaccgaaacagacagcgacggtgaccgccgcatcgaactcgcgtggggc
gacatcgaattccgcaccgcacaggaactcctcgcagcggaccccgggctccactacgac
ctcgtcattctggacgaagcccaccggtacagcagcgggcggcgcgacagtcgcggatgg
cgcgacctgttcgacgacctcacgacgaacgccgacagcgtcctagcgatgtccgggtcg
atagacgacgaatggctcggtgactccggcgtcaaagacgcgctcgaagcgaacctcgca
cagtgcatcgagttcggcatcaccgaagcccgcgagcagaacgtcatcgcagatttccgg
tgggacgtgtgttacgccgcaagcaactctggagacacgctctccggggtcgccgactcg
acgaccacactcacaccggcatacgacaccgacacgcacaaattcacaccgcaagagctc
accggtgacgtcccagcgaccgtcccggacacgttcgagacgctccgggacctccggtcg
ttcgcgcagagtaaagacgggaaagacgcgcgcgatcagtcagaatcgttcgacacgttc
gccaccgcagcgttctcccgccgaccgaaacgctggcaactcaacccgccgcacaacacg
atccggcagctcctcaccgaacacgttccggatcggaaagccgtcgtcctcgtacagagt
tacgcgcaagccgacgctgtctctgaacatcttgcggactggttcgacgcggacaccgtg
tacacgccggcgaaggacgaagccgcgccgtacgacacgatcgcggcgttcaaacaagcg
gacgccggcgtgctcgtcgggcccggtgacgtgctcggcgtcggtgttgacctgcccgac
gccggcatcgccgtgaacctcgctaaaggcggggtgaacgcgtcactcattcaacgcatc
ggccggatcctccggaatccgaccggcgacaagcacgcgcacttctaccacgtcgtcacc
atccccggcgaggccgacgcgcgtctccccggcgaagacggccggcgactcctccgccgc
gccgccgaattccgcgcactcgggtcccgattccgcgaacaccccgggttcgtcgccgtc
accgacaccaccagtcacatcctctgcgaactcgaaaccgccggcgcacgcgccaccatc
gccgacaaccgcgacacgagcgacatggtcgacgacgacgtcgcccgcaccctgttagat
gaactcatcgacgagatcagcttgacactcgacgacacgcgcgaccagcccgtactcacg
acgtactggcagcccgaatcactcacccccggcgcgatgcccgtccacgacagcgtcacc
caacccaaatccacggaccagtcggaggacacgagcgacaccactccgacggacatcacc
gtcacagtcaccgacacgaacgactcaccgatcgggaacgctgtagtcatcgccgaaaca
accactgactccaccgagagcattaccgacgcggacggcaccgtcaccatcacaccgcca
acgtctggcagtgaccggtcgctgttcgtgtctcgcgctgggtaccagaaccaaaccagc
gagcttccaagtgagaacaacacggtcacaatcacacttccggacgcaacgcacactgtc
ctgaccgcacacgcagacgaggacagtgactctgatgacaccgaaaccgactccgaagac
gaacatgctgagtctgtacaaccagacgtggacgaactatgtgctgaaattcaacgtgtt
gatggcgtccttgccgggtacccgactcttgaggacatggacacgcacagcaggtacgca
cccgcacgctacatggacgtgttcgaatcgtggaccgatgcgctacacgctgccgacatc
gatccggaccaacgcgtcatcgatgacgtacaacgcgtcgccgacaccgtcgatggcgtg
ccgacaataagtgacatcaccacgcacagccactacaccccagccacactcggcgagcac
ttcggcagttttgacgctgccatcgccgccgccggcgtccacgaccaagaccagtcctca
ccatcttcacccgacactgacactgactccgcgaaaactggttcggctagtaccacgcaa
aatacaagcgagccggcggagacaacgagtacgtcgtccactgtctcggatactgaggca
cctgctacggacacacccactgagacctccacgcgtgacaagctcatcagtgaactacag
gcgttggcgactgactgggataacatcaaccggaagctcctgtactccgtcggcagtcac
catccggacgagtacgaagaggtcttcgggagtttggacgccgcactcgttgaagcaggc
gtcgccgacccggacaccgtgaagacagtcatcgcagcccaatcgacactgaccgataag
cagaacgaactcatcggtgaactacaggatctcgcagatgagtgggatacgatcgaccgg
aagctcctgtactccgtcggcagtcaccacccagatgagtacgatgacgcattcggcagt
gtggacgctgcactcgtcgaagcaggattggcagacaccgatgcgaccggtgacgacgca
gccgtctcaactgacgagacctcgacagacacgacatccacggcgacgaccgagaaacaa
ccgcagtcagtcgattcgagtaccaccgctgagattccttcaaacgaacttgctgaactg
tacgtcgcgttcgatcggttccagcacctgttaaccgaactcgcggacaaactcgacacc
gatggtaccaccccaatggagcgatgggccgaagccgtggccgatcactggggcgaggac
gggccagacggcgcaccaaactacggaacccaacagcgcgaccggaacgacttcagcatc
aacgactaccgcgacgcgcacggcgacggcgaccgcgtcactgacttccaccacgtcgaa
ttcgccgccgtcaacgaccgcatccagcacttactcggcgacgcaatcgaagactgggac
cacgccgtccccgtcacacccaaatcgaacacgccgctccccgtcgctatcaccagcacc
gacgcactcaacacggccttcgaactcctcgacgaattccctgcataccctgacgccgac
cgcccaacaccggacgataccaaaatggacacggacggtcccatcctgcccgacggtcgc
gtcgacacactcaccgtcaccgtcctcgaccgcgaccaaaaccccggctcgaaacgcgac
gcccgcctacaagtcgcactcacagacggcaccgaagtcccgctcgacatctggagcacg
cacgacctctcactcgactggaccgtcggcgacacttacacaatcgagcaagcccgacac
aaaagttgggagacaagcaccggaaccggccacgaactcagcagcacgaaagacttccac
gccacgccaactgacaccggctctgcgggcaacacgccggatattaacctgccgtcacaa
gcgggcacggacacgaattcgacttccgagcgtagccgagacgccagtacgagcggcgca
aaaagcgcttcgagcagtgggagaagtcaatcgagcagcagcggcaccccgagccggggc
gatctcctcgacgcgatacagcgcgtcggcgagacgatcgaccggccgttgaaagcgggt
gacgtaagcgacaccacagcgtattccgtgaatgacgtcacgcgcgtgttcggatcttgg
cagaacgcactcgactcagccggcatcgataacaaagcccgactcatcgacgacctgcac
cgcatcgcccacaaacttggacaccggcccaccacgaccgaaatgaacgagcacgggcac
gtctccgccaccacctacgccacgtacttcggcacgtacaccgccgcgattgagcaggca
ttcgatgaaacggaagccactgccactcgttcatcgaccgaagtagacaccacagatcga
agtaagtctgctaaaacagatcctgagacaagtacagcgacggatgcgacagtgaccgag
ctagacactgaaggcggaaaccaggaaggtgctagtgatcacgacgacactgtaacaaat
tccgacaaagggattattagcgatattatgaatgatttcgacgagctttctgattctgga
tcagagtga
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