Halorubrum salinarum: HPS36_11830
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Entry
HPS36_11830 CDS
T07841
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hsai
Halorubrum salinarum
Pathway
hsai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HPS36_11830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsai03021
]
HPS36_11830
Transcription machinery [BR:
hsai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HPS36_11830
Prokaryotic type
Archaeal type
TFB
HPS36_11830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_N
Sigma70_r4
Cyclin_C
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-ProteinID:
QKG93519
UniProt:
A0A7D4CTM4
LinkDB
All DBs
Position
complement(2312914..2313933)
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AA seq
339 aa
AA seq
DB search
MSEEFIEEIDDILSDVLSDVDSTSPAEIEQNITFGQSVSAERQTAIVDGRINQLAAELDV
PEAAVDLAKSLRDQYRNQRGDLIGTALELVAASCLYCAVKVTEVPLDPTDFVAADDTVVT
RKALLRRSKDIASTVGLDPSAFFGSEHYVDRYCDALDVTDAVNERAREIIEITEESGLSS
GKSPSGWAAAAVYNACLDVGEKRTQQELSRVANVSEVTIRNRYQEQRAELRQVDSLPSDP
VGVINHVVDASGVDNPTRELAELLIREARSEQYPVDADATLWGLAALRRASQLTDGDVKL
KTLSQHIDEDSDAIKSRASGLQSVITQAELDEFRATHVQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggagttcatcgaagagattgacgacattctctcagatgtactcagcgacgtc
gattctacatcacctgcagagattgaacagaacatcacgttcggacagtcggtgtctgct
gagcggcaaacagcgatcgtagatggccggatcaaccagttagcggctgagttagatgtt
cccgaggcggccgtcgatcttgcgaaatccctgcgcgatcagtaccgtaaccagcgcgga
gacctcatcgggaccgcgctcgaattagtcgccgcctcgtgcttgtactgcgcggtcaaa
gtcacggaagtcccgttggatccgactgatttcgtcgctgctgacgataccgttgtcacg
cggaaagcactgcttcgccgttcgaaagatattgcgagtaccgtcggactcgatccgtct
gcgttctttggcagcgaacactacgtggaccggtactgcgacgcgcttgacgtgactgac
gcagtcaacgagcgtgcacgggaaatcatcgaaatcaccgaagagtccgggttgtccagc
gggaaaagcccgtccgggtgggccgctgccgccgtgtacaacgcgtgtctcgacgtcggg
gagaagcgaacgcaacaggaactcagccgtgtagcgaacgtctccgaagtaacgatcaga
aaccggtatcaggaacagcgcgcggagctgcgacaggtagattcgctcccatcggaccca
gttggcgtcatcaaccacgttgtagatgcgagcggagttgacaatcctacgcgggaacta
gctgaactccttatccgggaggcacgcagcgaacagtaccctgtcgacgccgacgcgaca
ctgtggggattagctgcactgcgccgcgcatctcagctcacggacggggatgtcaagctc
aaaactctgtcacagcatatcgacgaagattcagatgcgattaaatctcgtgcttctggt
ctacagtctgtcattacacaggcagagttagatgagttccgagcgactcatgtacagtaa
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