Halorubrum salinarum: HPS36_11960
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Entry
HPS36_11960 CDS
T07841
Symbol
trmY
Name
(GenBank) tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY
KO
K16317
tRNA (pseudouridine54-N1)-methyltransferase [EC:
2.1.1.257
]
Organism
hsai
Halorubrum salinarum
Brite
KEGG Orthology (KO) [BR:
hsai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsai03016
]
HPS36_11960 (trmY)
Enzymes [BR:
hsai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.257 tRNA (pseudouridine54-N1)-methyltransferase
HPS36_11960 (trmY)
Transfer RNA biogenesis [BR:
hsai03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
HPS36_11960 (trmY)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrn_RNA_2
DUF4350
Motif
Other DBs
NCBI-ProteinID:
QKG93543
UniProt:
A0A7D4D0G6
LinkDB
All DBs
Position
complement(2342507..2343121)
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AA seq
204 aa
AA seq
DB search
MRQFVVIGRDVPTDPDAISLSDIPGAGRLDLLCRCVSAGLFLSHGIRESVRVHLVIADEF
TVTVDADTVRHLHPDERNVAARIRDALDAKADAIGHMPADVSPGVEIRRMGLDATLDRLV
GDGGRGPDGTLVQLHEDGDPLVDAEPPEDPVFVLSDHHDFAPEEAEAVAERAERRLRVGP
ELLHADHAVTVVHNWLDTDGYAEY
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagttcgtcgtcatcggccgcgacgtgcccaccgaccccgacgcgatctcgctg
tccgacatccccggggccggccggctcgacctcctctgtcgatgcgtgagcgccggcctg
ttcctctcgcacgggatccgcgagtcggtccgggtccacctcgtgatcgccgacgagttc
accgtcaccgtcgacgccgacacggtccgccacctccaccccgacgagcgcaacgtcgcc
gcgcggatccgcgacgcgctcgacgcgaaggcggacgcgatcgggcacatgcccgcggac
gtgtcgccgggcgtcgagatccgccggatggggctcgacgcgaccctcgaccggctcgtc
ggcgacggcgggcgcggccccgacgggacgctcgttcagctccacgaggacggcgacccg
ctcgtcgacgccgagcctccggaggaccccgtgttcgtgctttccgaccaccacgacttc
gcgcccgaggaggccgaggcggtcgccgagcgcgccgagcggcggctgcgcgtcggcccc
gaactgctccacgccgaccacgccgtcaccgtggtccacaactggctcgacaccgatggc
tacgccgagtactga
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