Halorubrum salinarum: HPS36_12780
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Entry
HPS36_12780 CDS
T07841
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hsai
Halorubrum salinarum
Brite
KEGG Orthology (KO) [BR:
hsai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsai03016
]
HPS36_12780 (truA)
Enzymes [BR:
hsai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HPS36_12780 (truA)
Transfer RNA biogenesis [BR:
hsai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPS36_12780 (truA)
Prokaryotic type
HPS36_12780 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
HVO_A0261_N
GLTSCR1
Motif
Other DBs
NCBI-ProteinID:
QKG93696
UniProt:
A0A7D4C262
LinkDB
All DBs
Position
complement(2497882..2498799)
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AA seq
305 aa
AA seq
DB search
MTGASNGRDTVTRAFRVAYDGRAYAGFQRQPHARTVADALLEALADHGLVDRGDGSTHAT
PPGYAAAGRTDAGVSAVAQTVAFEAPTWLTPRAFNGHLPGSVRVWAAADVGDEFHATHDA
VRRTYRYHLYAPESGAESASDRARRDPEHAVDDDRFLEALARFDGERDFHNLTTDETGTV
RDLDAGATREGDTLVVELSADGFPRALVRRVVAAARAVGRGTADLVWIDRLLDAEPIPGD
RGIGPAPPEPLVLWDVTYPDVSFAVDREAAESARIAFGERHRDARHAASATGAVSDRLFS
AVEPD
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgacgggcgcgtcgaacgggcgcgacacggtcacgcgcgccttccgcgtcgcgtacgac
gggcgggcgtacgccggcttccagcgccagccgcacgcccgcaccgtcgcggacgcgctc
ctcgaggcgctcgcggaccacggcctcgtcgaccgcggcgacgggtcgacgcacgccacg
cccccgggctacgccgcggccggccggaccgacgcgggcgtctcggcggtggcccagacc
gtcgccttcgaggcgccgacgtggctcacgccccgcgcgttcaacggccacttgcctggg
tcggtccgagtctgggccgccgccgacgtgggtgacgagttccacgcaacgcacgacgcg
gttcgacggacgtaccggtaccacctctacgcgcccgagtccggggccgaatccgcctcg
gaccgcgcgcggcgagaccccgagcacgcggtcgacgacgaccgatttctggaggcgctc
gcgcggttcgacggcgaacgcgacttccacaacctgacgaccgacgagacggggacggtc
cgcgacctcgacgcgggcgcgacccgcgagggcgacacgctcgtcgtcgagctctcggcg
gacggcttcccgcgggcgctcgtgcggcgggtcgtcgccgcggcccgcgcggtcggtcgc
ggaaccgccgacctcgtgtggatcgaccggctgctcgacgccgagccgataccgggcgac
cgcggtatcggtcccgcgccacccgagccgctcgtgctgtgggacgtgacctaccccgac
gtctcgttcgcggtcgaccgcgaggccgcggagagcgcgcggatcgccttcggcgagcgg
caccgggacgcgcgacacgccgcgtccgccaccggcgcggtcagcgacaggctgttctct
gcggtcgagccggactga
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