Halorubrum salinarum: HPS36_12930
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Entry
HPS36_12930 CDS
T07841
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hsai
Halorubrum salinarum
Pathway
hsai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HPS36_12930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsai03021
]
HPS36_12930
Transcription machinery [BR:
hsai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HPS36_12930
Prokaryotic type
Archaeal type
TFB
HPS36_12930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Trm112p
Sigma70_r4
Zn_ribbon_LysW
UPF0547
DZR_2
C1_1
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QKG93718
UniProt:
A0A7D4C6Z2
LinkDB
All DBs
Position
complement(2526535..2527584)
Genome browser
AA seq
349 aa
AA seq
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MTETYTYSDGGTERDRLADRGDASATGEHTRTRDAAGAESTSVDERTESEQITTCPECDG
RLATDTEHGETVCSDCGLVVEEDSVDRGPEWRAFNSGERDSKSRVGAPTTNMMHDKGLST
NIGWQDKDAYGKSLTGRQRRRMQRLRTWNERFRTRDSKERNLKQALGEIDRMSSALGLPD
NVRETASVIYRRALGENLLPGRSIEGVATASLYAAARQVGNPRSLDEFTAVSRVEKMELT
RTYRYVIRELGLRVQPADPTSYVPRFVSRLDLSEETERRARELLDDAANAGITSGKSPVG
LAAAAVYAAALLSNEKVTQSQVSDVADVSEVTIRNRYKELLDASGTVSA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacagagacatacacctacagcgacggcggcacggaacgagaccgactcgcggaccgg
ggcgacgcgtccgcgaccggcgagcacacccgaacgagggacgcggcgggagcggagtcg
acgagcgtcgacgagcgcacggagagcgagcagatcaccacctgtccggagtgcgacggc
cggctcgccacggacacggaacacggcgagacggtgtgtagcgactgcgggctcgtcgtc
gaggaggactcggtcgaccgcggcccggagtggcgcgcgttcaactccggcgagcgcgac
agcaagtcgcgtgtgggggcccccacgacgaacatgatgcacgacaaggggctctcgacg
aacatcggctggcaggacaaagacgcctacggcaagtcgctcacggggcgacagcggcgc
cggatgcagcggctgcggacgtggaacgagcgcttccgtacccgcgactccaaggagcgc
aacctcaagcaggcgctcggcgagatcgaccgcatgtccagcgcgctgggcctcccggac
aacgtccgcgagaccgcgtcggtcatctaccgccgcgcgctgggcgagaacctccttccg
ggccgttcgatcgagggcgtcgccaccgcctcgctgtacgccgccgctcggcaggtgggg
aacccccggagcctcgacgagttcaccgcggtctcccgggtcgagaagatggagctcaca
cggacgtaccgctacgtcatccgcgagctcgggctgcgcgtccagcccgcggacccgacg
agctacgtgccccggttcgtctcgcggctcgacctctccgaggagaccgagcggcgcgcg
cgcgaactgctcgacgacgccgcgaacgcggggatcaccagcggcaagtcgccggtcggg
ctcgccgcggccgccgtctacgccgcggcgctgctgtcgaacgagaaggtgacccagagc
caggtgtccgacgtcgccgacgtctcggaggtcaccatccggaaccggtacaaggagctg
ctcgacgcgagcggcaccgtgagcgcctga
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