Haloterrigena salifodinae: JMJ58_01235
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Entry
JMJ58_01235 CDS
T07070
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hsal
Haloterrigena salifodinae
Brite
KEGG Orthology (KO) [BR:
hsal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsal03400
]
JMJ58_01235
DNA repair and recombination proteins [BR:
hsal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JMJ58_01235
Archaeal homologous recombinant proteins
JMJ58_01235
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QRV15556
UniProt:
A0A8T8E228
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All DBs
Position
complement(253641..255029)
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AA seq
462 aa
AA seq
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MTRVIHTGDTHIGYQQYNSPQRREDFLEAFRSVVEDAVADGVDAVVHAGDLFHDRRPSLV
DLQGTIEILRTLDDADIPFLAVVGNHESKRDAQWLDLFADLGLATRLGADPEIVGDVALY
GLDFVPRSRRDDLEYAFEPIPDAAEHATLVTHGLFEPFAHADWDTEEVLEESTVDFDAVL
LGDNHKPDTAEVMDTWVTYCGSTERASASEREDRGYNLVGFDEDSGVAISRRGLADTREF
VFVDVELEAGEGVDRVQERVRQHDLEDAVVVVTVEGEGKPITPATIEEAAIDRGAIVARV
NDRRELPDEDEEVSVSFADPDAAVRERVRELGLSDAARSIDETVRDDDLVDSNVRETVER
RVRDLLEDDESAFDPAPERAPEDEDVTTVADELAGDDASGDPSAAADAESVAANGGEAAA
TADDEPDAAEAETESAPAEEDSSEEPTDDSVDADTASLGDFA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgggttatccatacgggcgatacccacatcgggtatcagcaatacaactctcca
cagcgccgcgaggacttcctcgaggcctttcgctcggtcgtcgaggacgcggtcgccgac
ggcgtcgacgccgtggtccacgccggcgacctctttcacgaccggcggccgagtctggtc
gacctccagggcaccatcgaaattctgcgcacgctcgacgacgccgacattccctttctg
gccgtcgtcggcaaccacgagtcgaaacgcgacgcccagtggctcgacctcttcgcggat
ctcggactggcgacccgcctcggcgccgaccccgagatcgtcggcgacgtcgccctctac
ggtctcgatttcgttccccgttcgcgccgcgatgacctcgagtacgcgttcgaaccgatc
cccgacgccgccgagcacgcgacgctggtgacccacggcctcttcgagcccttcgcccat
gccgactgggacaccgaagaagtgctcgaggagtcgacagtcgactttgatgccgtcctg
ctcggcgacaaccacaaacccgacaccgcggaggtcatggatacctgggtcacctactgc
gggtcgaccgagcgcgcgagcgccagcgaacgggaggaccggggctacaacctcgtgggc
ttcgacgaggacagcggcgtcgcgatcagccgccgcgggctcgcggacacccgcgagttc
gtcttcgtcgacgtcgaactcgaggccggcgagggcgtcgaccgcgtccaggagcgagtt
cgccagcacgacctcgaggacgccgtcgtcgtcgtcaccgtcgagggagaggggaagccg
atcacccccgcgacgatcgaagaggccgccatcgatcgcggtgcgatagtcgcccgagtc
aacgaccgccgggaactacccgacgaggacgaagaggtctccgtcagcttcgccgacccc
gatgcggcggtccgcgagcgcgtccgagaactgggactcagtgacgccgcccggagcatc
gacgagaccgtccgcgacgacgatctggtcgactcgaacgtccgcgagaccgtcgagcgc
cgcgttcgcgacctgctcgaggacgacgagtcggcgtttgatcccgcgcccgaacgcgcc
cccgaggacgaggacgtgacgaccgtcgcggacgaactggccggcgacgacgcgagcggc
gatccctcggcggccgctgatgcggaatcggtggccgcgaacggcggtgaagccgcagcg
acggccgacgacgaacccgacgccgccgaagccgaaacggaatccgcgcccgcggaggag
gactcgagcgaggaaccgacggacgactcagtcgacgccgacaccgcttcgctgggtgat
ttcgcgtga
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