Haloterrigena salifodinae: JMJ58_01330
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Entry
JMJ58_01330 CDS
T07070
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hsal
Haloterrigena salifodinae
Brite
KEGG Orthology (KO) [BR:
hsal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsal03016
]
JMJ58_01330 (truD)
Enzymes [BR:
hsal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
JMJ58_01330 (truD)
Transfer RNA biogenesis [BR:
hsal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JMJ58_01330 (truD)
Prokaryotic type
JMJ58_01330 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QRV15574
UniProt:
A0A8T8E174
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All DBs
Position
complement(266159..267538)
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AA seq
459 aa
AA seq
DB search
MRPAHPTEQAVGMEHYVTDTDGVGGRLRADDDHFRVRERERFDTEPVDAPTDAYPYLVVR
ATLSGWDTNDFAGRLSDALGVSRERVNWAGTKDKYAVTTQLFSIYGADPEALPDVRGADI
EVVGRAGRSLEFGDLAGNEFELVVSDPDDPQRATEITDELHAFGGLENGADETDDDAADD
ETTVSIGVPNFFGQQRFGSRRPVTHEVGLEIVRGDWAGAVMAYLGNPTDAEPESTQEARA
FVEETRDWQEALERFPNRLRYERSLCHGLAEVDDDPEPEDYRATLERLPSNLQRLFVHAA
QSYAFNLMLSERLERGLPFDEPVAGDVACFADTDAPAGLELPDTDRLQRVTDRRVRSVRR
HCERGRAFVTAPLVGTETELADGEQGEIERAILDELDLEPADFDLPGEFYSSGTRRAILV
RTTLELETEPLTLSFGLPKGSYATVLLREYLKVDPVDLG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccggcacatccaacggagcaggccgtcggcatggagcactacgtcaccgatacc
gacggcgtcggcggccgcctgcgagcggacgacgaccacttccgcgtgcgcgaacgcgag
cggttcgataccgaacccgtcgacgcgccgacggacgcctacccctacctcgtcgttcgc
gcgacgctgtcgggctgggacaccaacgacttcgccggccggctctcggacgcactcggc
gtctcccgcgagcgggtcaactgggccgggacgaaggacaagtacgcggtcaccacgcag
ttgttctcgatctacggcgccgatcccgaggccctccccgacgtccgcggtgctgacatc
gaggtcgtcgggcgggcaggtcggtcgctcgagttcggcgacctcgcgggcaacgagttc
gaactggtcgtcagcgaccccgacgacccccagcgcgcgaccgagatcacggacgaatta
cacgccttcggcggtctcgagaacggggccgacgagacggatgacgacgcggccgacgac
gagacgaccgtctcgatcggcgtccccaacttcttcggccagcagcgctttggcagccgc
cgcccggtcacccacgaggtcggcctcgagatcgtccgcggcgactgggccggcgcggtg
atggcctacctcgggaaccccaccgacgcagagcccgagtccacgcaggaggcccgcgcg
ttcgtcgaggagacccgcgactggcaggaagccctcgagcgctttcccaatcgcctgcgc
tacgagcggtcgctctgtcatgggctcgccgaggtcgacgacgatcccgaacccgaggac
taccgcgcgaccctcgagcgcctgccgtcgaatctccagcgactgttcgtccacgccgcc
cagtcgtacgcgttcaacctgatgctctccgagcgcctcgagcgcgggctgccgttcgac
gaacccgtcgcgggagacgtggcctgcttcgccgacaccgacgcgccagcggggctcgaa
ctgcctgacaccgaccgcctccagcgggtcaccgaccgtcgcgtgcgctcggtccggcgc
cactgcgagcgcggccgggcgttcgtcacggcgccgctggtgggcaccgaaacagagctc
gccgacggcgagcagggcgagatcgaacgcgccatcctcgacgagttggacctcgagccc
gccgacttcgatctgccgggcgagttttactcgagcggcactcggcgcgcgattctggtt
cggacgaccctcgaactcgagaccgagccgttgacgctctccttcggtctgccgaaggga
tcgtacgcgacggtcctccttcgggagtacctgaaggtcgatccggtcgacctgggatga
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