Haloterrigena salifodinae: JMJ58_02535
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Entry
JMJ58_02535 CDS
T07070
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
hsal
Haloterrigena salifodinae
Pathway
hsal00521
Streptomycin biosynthesis
hsal00523
Polyketide sugar unit biosynthesis
hsal00525
Acarbose and validamycin biosynthesis
hsal00541
Biosynthesis of various nucleotide sugars
hsal01100
Metabolic pathways
hsal01110
Biosynthesis of secondary metabolites
hsal01250
Biosynthesis of nucleotide sugars
Module
hsal_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
hsal00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JMJ58_02535 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JMJ58_02535 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JMJ58_02535 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JMJ58_02535 (rfbB)
00525 Acarbose and validamycin biosynthesis
JMJ58_02535 (rfbB)
Enzymes [BR:
hsal01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JMJ58_02535 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
NmrA
KR
GpA_nuclease
Motif
Other DBs
NCBI-ProteinID:
QRV15800
UniProt:
A0A8T8E2X1
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All DBs
Position
517970..518890
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AA seq
306 aa
AA seq
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MRILVTGGAGFIGSNYVRYLLENSEDEVVTLDALTYAGSRDNLDGALEHPNHEFVEGSIC
DQELVEELVSDADAIVNFAAESHVDRSIEGAAPFVETNVEGTQTLLDAAVDADVDRFLQI
STDEVYGQILDGTFSEEDPLNPRNPYAATKASADLLAKSYETTHGLPVLITRTCNNFGPR
QHTEKLIPKFIRNAAAGNELPVYGDGSNVREWIYVEDNCQALDLVLREGEPGEVYNIGSG
EERTNLEVTEAILDAVGGSEDQITFVEDRAGHDQRYALETDKIERLGWEPSWSFEAGLEQ
AVEYYL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatactcgttaccggtggcgcaggattcatcggatctaactacgtccgctatctc
ctcgagaacagcgaggacgaggtcgtcacgctcgacgcactcacctacgcggggtcgcgg
gacaacttagacggcgcgctcgagcatccgaaccacgagttcgtcgagggaagcatctgt
gaccaagaactcgtcgaggagcttgtttccgacgccgacgcgatcgtcaacttcgccgcc
gagtcccacgtcgatcgatccatcgagggcgcggcccccttcgtcgagacgaacgtcgag
ggaacccagacgctcctcgatgcggcggtcgacgccgacgtcgaccggttcctccagatc
tcgacggacgaagtgtacggccagatcctcgacgggaccttcagcgaggaggatcccctg
aacccgcgcaatccgtacgcggcgacgaaggccagcgccgatttgctggccaagagctac
gagacgacgcacgggttgcccgtgctcatcacccggacgtgtaacaacttcggcccgcga
caacacacggagaaactgatcccgaagttcatccggaacgccgcggcgggcaacgaactc
cccgtgtacggtgacggatcgaacgtccgcgagtggatctacgtcgaggacaactgtcag
gcgctcgatctcgtcctccgcgagggcgaacccggcgaggtgtacaacatcggctccggc
gaggagcggacgaacctcgaggtgaccgaggcgattctcgacgccgtcggcgggtcggaa
gaccagatcaccttcgtcgaggaccgcgcgggccacgaccagcgctatgcgctcgagacg
gacaagatcgaacgcctaggctgggagccgtcgtggtcgttcgaagcgggactcgaacag
gccgtcgagtactatctctaa
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