Haloterrigena salifodinae: JMJ58_04120
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Entry
JMJ58_04120 CDS
T07070
Symbol
tfe
Name
(GenBank) transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hsal
Haloterrigena salifodinae
Pathway
hsal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JMJ58_04120 (tfe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsal03021
]
JMJ58_04120 (tfe)
Transcription machinery [BR:
hsal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
JMJ58_04120 (tfe)
Prokaryotic type
Archaeal type
TFE
JMJ58_04120 (tfe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Rad50_zn_hook
DNA_ligase_ZBD
DUF7129
Zn_ribbon_6
Zn_ribbon_LysW
Zn_ribbon_3
Sigma70_r3
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QRV16090
UniProt:
A0A8T8E3N4
LinkDB
All DBs
Position
862354..862872
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AA seq
172 aa
AA seq
DB search
MAFEDLLEDPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELSEELDLELNDVRRALFILY
ENDLATYRRLRDEDSGWLTYLWTFEYDNIPENLEDEMYRLHEALEERREYERNHEFYLCE
ICSIRFEFGEAMDFGFECPECGSPLESMDNDRLVNAMDDRLDALEDELNLEA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggacctgctcgaggatccggtcatccagaagtacttgcacgagctggtc
ggtcccaaggggatgcctgtcgcggcggcgccgccggacggggaagtgaccgacgaggag
ctctcggaggagctggatctcgagttgaacgacgtgcggcgggcgctgtttatcctgtac
gagaacgatctcgcgacctaccgacggctgcgcgacgaggactcggggtggctcacctac
ctctggacgttcgagtacgacaacattccggagaacttagaagacgagatgtaccgcctt
cacgaggccctcgaggaacgccgggagtacgagcgcaaccacgagttctacctctgtgag
atctgctcgattcggttcgagttcggcgaggccatggacttcggcttcgagtgccccgag
tgtggctcgccgctcgaatcgatggacaacgatcggctcgtgaacgcgatggacgaccgc
ctcgacgccctcgaggacgaactcaacctagaggcctga
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