Haloterrigena salifodinae: JMJ58_04795
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Entry
JMJ58_04795 CDS
T07070
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hsal
Haloterrigena salifodinae
Pathway
hsal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JMJ58_04795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsal03021
]
JMJ58_04795
Transcription machinery [BR:
hsal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
JMJ58_04795
Prokaryotic type
Archaeal type
TFB
JMJ58_04795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
A2L_zn_ribbon
Anti-TRAP
Zn_ribbon_LysW
DUF7560
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QRV16215
UniProt:
A0A8T8E300
LinkDB
All DBs
Position
1002979..1003968
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AA seq
329 aa
AA seq
DB search
MSNTPSNTRVRRTEHETDDTTETTDESEQSNLDCPECAGNLVVDDEHGETVCEDCGLVVE
EDSVDRGPEWRAFDATEKNEKSRVGAPTTNTMHDKGLSTNIDWRNKDAYGNSLGSRQREK
MQRLRKWNERFRTRDSKERNLKQALGEIDRMASALGLPTNVRETASVIYRRALDEDLLPG
RSIEGVSTACVYAAARQAGVPRSLDEIADVSRVEKNEIARTYRYVVRELGLEVQPADPES
YVPRFASGLELSDEAEHRARALLQNAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAA
VSDVADISEVTIRNRYHELLEAEETLGLA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacaccatcgaacacaagagtacggcgtaccgagcacgaaacagacgacaca
accgaaacgacggacgaaagcgagcagagcaacctcgattgccctgagtgtgcgggcaac
ctcgtcgtcgacgacgaacacggcgagaccgtctgcgaggactgcggactggtcgtcgag
gaggactcagtcgaccgcggccccgagtggcgggccttcgacgctaccgagaaaaacgag
aagtcccgcgtgggcgcgcccacgacgaacacgatgcacgacaaggggctctcgacgaac
atcgactggcgcaacaaggacgcctacgggaactccctgggctcgcgccagcgcgagaag
atgcagcgcctccgcaagtggaacgagcgcttccgcacccgcgactccaaggagcgcaac
ctgaaacaggcactcggcgagatcgaccgtatggcctccgcgctgggactcccgacgaac
gtccgcgagactgcctccgtcatctaccgccgcgcgctcgacgaggatctgctccccggc
cgttcgatcgagggcgtctcgacggcctgcgtctacgccgctgcccgccaggccggcgtg
ccccgtagcttagatgagatcgccgacgtctcccgcgtcgagaaaaacgagatcgcccgc
acctaccgctacgtggtccgggaactcggactcgaggtccagcccgccgaccccgagagc
tatgtcccccgctttgcctcgggactcgagctctcggacgaggccgaacaccgcgcccgt
gcgctcctccagaacgccaaggagaagggcgtccacagcggcaagtcgccggtcggcctc
gcggctgccgcggtctacgccgccgccctgctgaccaacgagaagaccacgcaggccgcc
gtcagcgacgtcgccgacatctccgaagtgacgattcggaaccggtaccacgaactcctc
gaggccgaggagaccctcggtctcgcgtaa
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