Haloterrigena salifodinae: JMJ58_05295
Help
Entry
JMJ58_05295 CDS
T07070
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hsal
Haloterrigena salifodinae
Pathway
hsal03420
Nucleotide excision repair
hsal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JMJ58_05295
03430 Mismatch repair
JMJ58_05295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsal03400
]
JMJ58_05295
Enzymes [BR:
hsal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JMJ58_05295
DNA repair and recombination proteins [BR:
hsal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JMJ58_05295
MMR (mismatch excision repair)
Other MMR factors
JMJ58_05295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
Viral_helicase1
UvrD_C
UvrD_C_2
AAA
AAA_16
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QRV16308
UniProt:
A0A8T8E3H3
LinkDB
All DBs
Position
complement(1097692..1099677)
Genome browser
AA seq
661 aa
AA seq
DB search
MNIPEWLSERVGDDLKDAEIKGGDEYPPMPGQSVKLHGPPGTGKTTQLSLRVAILIEEHD
VNPEDIAWVTYRRSLADEITDKLVDWGVITSSEVRDLDDWSTVHAVSNGVTGLLDRDRRD
DDRNSLGPAVTEREKVAFSRGVLDVPFFPSEPWEQTRGQLLLNTFAWLSKNLYEPGNVAH
ARSCPMWDDLAREWPGIENEYEDLYETWAQWKQNNDLYEFHELLETALNSAVAPTSDVLI
IDEYHDAYPLMAAVAEKWMDAADTVMVAGDPDQVVNAFRGASPEFFEQLDMPTVLLDETW
RVPEEHWWMAARVLKQERSAPPVERKTRGRISEYRSPSMEYSRDQKRWLVPDPDTEASPA
WLVDRHGTDMIFLTRTQKQAQGVSAALDRAGIFHTAQDDVGGWDSINERRHLFNALQKLR
SLNPAAFGAAQGRLRQFDDSGKAPRSVRLSVDETIALLNHAEACYLAQSRSDTDSVVTTL
RMDSDKETVTADEVDEWAGEKFWTRYTAGAASVEHTNKGSLDAQDMRAIEAALTRYDSTC
IPDSIDTKVWTIHASKGSEAAHTVVYDGVTGRIQTGMGESEETAENEARTWYVALTRASE
HVHLMRGGFTWTKPYLPSDLAPTAGNAAERAIENGDVLAATTESGSDDGATGGATGVSAS
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccctgagtggctcagcgaacgggtcggcgacgacctgaaagacgcagaaatc
aagggcggcgacgagtacccgcctatgcccgggcagtccgtgaagctccacggcccgccg
ggaaccgggaaaacgacgcagctcagcctgcgcgtcgctatcctgatcgaagaacacgac
gtgaatccggaagacatcgcatgggtcacgtaccggcgctctctggctgatgagatcacc
gacaagcttgtcgactggggcgtcatcacgagcagcgaagtccgcgacctggacgactgg
tcgaccgtacacgccgtcagcaacggcgtgacgggtctgctcgaccgtgaccgccgggac
gacgaccggaacagcctcgggccggccgtgaccgaacgagagaaggtcgcgttctccagg
ggcgtgctggacgtgccgttcttcccctcggaaccgtgggagcagacgcgcggccaactg
ctcctcaacacgtttgcgtggctctcgaagaacctgtacgagcccgggaacgtcgctcac
gcccgttcctgcccgatgtgggacgacctagctcgggagtggcccggcatcgagaacgag
tacgaagacctgtacgagacgtgggcgcagtggaagcagaacaacgacctgtacgagttc
cacgaactgctcgaaacggcgctcaacagcgccgtggcgccgacgagcgacgtgctcatc
atcgacgagtaccacgacgcgtacccgctgatggcggccgtcgccgagaagtggatggat
gcggcggacaccgtcatggtcgcgggggatccggaccaggttgtcaacgccttcagaggc
gcgagcccagagtttttcgagcagctggacatgccgaccgtcctactggacgaaacgtgg
cgtgtccccgaagagcactggtggatggccgctcgcgtgctgaaacaagaacgcagtgca
ccgcccgttgagcgcaagacccgcggccgcatcagcgagtaccgcagcccgagcatggag
tacagccgcgaccagaagcgctggctagtccctgacccggacactgaggccagccccgcg
tggctcgtcgaccgacacggaacggacatgatattcctgacccggacgcagaagcaggca
cagggcgtcagcgccgctctcgaccgcgcaggcatcttccataccgcgcaggacgacgtc
ggcgggtgggacagcatcaatgagcgacgccacttgttcaacgctctccagaagctcaga
agcctcaacccggccgcgttcggtgctgcgcaaggccgcctcagacagttcgacgacagc
ggcaaagcaccgcgcagcgtgcgcctgagcgtcgacgagacgatcgcgctgctcaaccac
gccgaagcgtgctacctcgcgcagtcccgttcggacaccgacagcgtcgtcaccaccctc
aggatggacagcgacaaggagacggtgaccgctgacgaggtcgacgagtgggccggagag
aagttctggacgcgctacacggccggcgcagcgagcgtcgagcacacgaacaaaggaagc
ctcgacgcccaggacatgcgcgccatcgaagccgcactcacccgctacgacagcacgtgc
atccctgacagcatcgacacgaaggtctggaccatccacgccagcaagggtagcgaagcc
gcgcacacggtcgtctacgacggcgtgaccggccgcatccaaacgggcatgggagaatcc
gaagagacggccgagaacgaagcgcgcacctggtatgtcgcgttaactcgtgctagcgag
catgtacacctgatgcgaggcggcttcacgtggacgaagccgtaccttccgtctgacctg
gccccaaccgccgggaacgctgcggaacgtgcgatcgagaacggggatgtgctggccgcc
accaccgaaagtgggagcgacgatggtgctactggtggagcaacgggggtgagtgctagt
gactga
DBGET
integrated database retrieval system
