Haloterrigena salifodinae: JMJ58_06780
Help
Entry
JMJ58_06780 CDS
T07070
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hsal
Haloterrigena salifodinae
Pathway
hsal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JMJ58_06780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsal03021
]
JMJ58_06780
Transcription machinery [BR:
hsal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
JMJ58_06780
Prokaryotic type
Archaeal type
TFB
JMJ58_06780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_RRN7
Cyclin_N
Sigma70_r4
Trm112p
Motif
Other DBs
NCBI-ProteinID:
QRV16578
UniProt:
A0A8T8E4C1
LinkDB
All DBs
Position
1400087..1401046
Genome browser
AA seq
319 aa
AA seq
DB search
MARPSRQRERESESTETTDQRERERACDECSDGTLVTSEDQGELVCDQCGLVVEGSNIDH
GPEWRAFNHSERQSKSRVGAPTTQTMHDKGLTTSIDWKNQDAYGRSISADKRSQMRRLRK
WQERIRTKDAGERNLQFALSEIDRMASSLGIPRSVREVACVIYRRALDEDLIRGRSIEGV
ATSTLYAACRMEGIPRSLEEVAAVSRVERKEIGRTYRYVAQELSLEMEPVDPKQYTPRFC
SELDLSEEVQAKATEIIDTTTEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREIAEVAQ
VTEVTIRNRYQEQIEAMGI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcccatcccgccagcgcgaacgcgaatcagaatcgaccgaaaccacagatcaa
cgcgagcgcgagcgggcgtgtgacgagtgttccgacggaacgctcgtcacgagcgaggat
cagggcgaactcgtctgcgatcagtgcggactcgtcgtcgagggctcgaacatcgaccac
gggccggagtggcgcgcgttcaaccactcggagcgacagagcaagtcccgcgtcggcgcg
ccgacgacccagacgatgcacgacaaggggctgacgacctccatcgactggaagaaccag
gacgcctacggccgctcgatctccgcggacaagcgcagccagatgcgccgcctgcgcaag
tggcaggaacgcatccgcaccaaggacgccggcgaacgcaacctgcagttcgctctcagc
gagatcgatcggatggcctcctcgcttggcattccgcggtcggtccgcgaggtcgcctgc
gtcatctaccggcgtgcgctcgacgaggacctcatccgcgggcgctccatcgagggcgtc
gccaccagcaccctctacgccgcctgccgcatggagggcatcccccgcagcttggaggag
gtcgccgccgtctcccgcgtcgagcgcaaggagatcggccgcacctaccgctatgtcgcc
caggagctcagcctcgagatggagcccgtcgatccgaaacagtacacgccgcgcttttgc
tcggagctcgacctctcggaggaggtccaggccaaggccaccgaaatcatcgacacgacg
accgagaagggactgctgtcgggcaagtcgcccacgggctacgccgccgccgcgatctat
gccgcctcgctgctctgtaacgagaagaagacccagcgcgagatcgccgaggtcgcacag
gtgaccgaggtgactattcgaaatcggtatcaggagcagatcgaagcgatgggcatctag
DBGET
integrated database retrieval system
