Haloterrigena salifodinae: JMJ58_12425
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Entry
JMJ58_12425 CDS
T07070
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hsal
Haloterrigena salifodinae
Brite
KEGG Orthology (KO) [BR:
hsal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsal03400
]
JMJ58_12425
Enzymes [BR:
hsal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JMJ58_12425
DNA repair and recombination proteins [BR:
hsal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JMJ58_12425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
UCH_UBL1
Motif
Other DBs
NCBI-ProteinID:
QRV17319
UniProt:
A0A8T8E6F8
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Position
2537801..2541559
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AA seq
1252 aa
AA seq
DB search
MDATVFDALDALEPRGNQREVIESRADCTSVDAGAGTGKTTTMLMRIERAIERDEVDPDD
VLVLTFANEAAGSIREAVAERLDPAAASAIDVYTYHSFCYRLVREYAYYLGYSPEFDVVT
ERKRRRIVGRLLASNDYGFATATRGDGSPDDLTAAVDDFIQSMSQEDVTPDELRERLPEV
RTLELCNEFVLWLERTAGQDLSFDNEALRYFNADDHLETAAASLVEYGKLLEYCREKIAE
APEPFREDAVVRDIDRYLRVVQDSVTNTIEALSLEDRTTKQLPRALFGNEIWRTATERVE
QSPFGRLKHYVEFLRLARHYAEVYADYHDALEEEGALDFDELVRTATGLLDDPAIADEIT
GEWTQVYCDEFQDTDETQFGLITELTDGPDRPDLLAIGDKDQAIYGWRGTDREGLDRLAD
AYDDHRGIELELNFRSRQEILDLTNRCDYGPQSSKRLREVGRTPGEYRTESDPTAGHETG
TEPDEDRPDRVVKIESDELGPSPADQVATTVSRLLNGEAENVPRRSLEDIAVIVRTNRHA
QAVADELRERRIPYEISGSPRGEIDPGIRTLISYLRVLVDPDADAHLRRVLLYRYRLSEA
DLATLQRADGSLYDAVMRIGSAEEVESTALEDPDRIRRARDHLAELEDVRDVYPLSGFVQ
RFREVTRLEWFLTGEEREELERIERFVDAYTGDSVIGTLTPSFVDALERTLQGGGGERTR
GTQSSDSVDVMTVHQAKGLEFDTVLVPYLSDEEWCVERDYAQRARYRLLAATLDDEIESP
LLADLATETVGEEWRVLHVALTRAENHLFVFGSEYDYDGDEDELGCATADACLSDDIEWS
VAGERMELWSSLRASFERVRETYPETVIDRTDELAAAASVDPGTITYYAGYDDRYVEPLE
TRDAIETVHRLGRLLRGETLLPAADAASHGLETGGSGGLGMANETGPNGEADPSRQVPTG
RRLSALTSDTVRFPVETLSNATTLPVALRHSYTALETHDTCPRKHYLDHVVRAFDDPTTG
VGETTARPEPDAAADRPLESGSRLVGTVFHDVAEEAFYREYRTREAWREAAVRQLTARDL
LEYREGVLGCIDRFFEADAADYDAPVADWEPVAAELPFSLEAVADVTGDVVGYIDSIRRT
PDGEVTVLDYKATAERIAPADATQLALYARACEQRFDEPVSAVGYVYVSEAVGPRVDLLD
ADELPPWPAVRERLAAVDDPSFEETTPGDHCRNCPHRSLGCGPDDLETSSDD
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
gtggatgcgaccgtcttcgacgctctggacgcccttgagccgaggggcaaccagcgggag
gtcatcgagagccgggcggactgcacctccgtcgacgccggcgccggaaccggaaagacg
acgacgatgctcatgcggatcgagcgggcgatcgaacgcgacgaggtcgaccccgacgac
gtgctggtgctgaccttcgccaacgaggccgccgggagcatccgcgaggcggtcgccgag
cgcctcgatcccgcggccgcatcggcgatcgacgtctacacctaccactccttctgttac
cggctggtccgagagtacgcctactatctgggctactcgccggagttcgacgtcgtcacc
gagcgcaagcgacgccggatcgtcggccgactgctcgcgagcaacgactatgggtttgcg
accgccacgcggggcgacggctcgcccgacgacctcaccgccgccgtcgacgacttcatc
cagtcgatgagccaggaggacgtcacgcccgacgagctccgagagcggctccccgaggtc
cgcaccctcgaactctgcaacgagttcgttctctggctcgagcggaccgccggccaggat
ctttccttcgacaacgaggcgctgcggtacttcaacgccgacgatcacctcgagacagcc
gccgcgtcgttggtcgagtacggcaagctgctggagtactgccgcgagaagatcgccgaa
gcgccggagccgttccgcgaggacgccgtcgttcgcgatatcgatcgctacctccgggtc
gtgcaggactcggtgacgaacacgatcgaagcgctctcgctcgaggatcggacgaccaaa
cagctgccgcgggcgctgtttggcaacgagatctggcggaccgcgaccgagcgcgtcgag
cagagcccgttcggccggctgaaacactacgtcgagttcctgcggctggcccgccactac
gccgaggtctacgccgactaccacgacgccctcgaggaggagggcgcactggacttcgac
gaactggttcggacagctaccggactgctggacgacccggcgatcgccgacgagatcacc
ggcgagtggacgcaggtctactgcgacgagttccaggacaccgacgagacccagttcgga
ctcattaccgaactcacggacgggccggaccgaccagacctgctcgcgatcggcgacaag
gatcaggcgatctacggctggcgcgggaccgaccgggagggactcgaccggctcgccgac
gcctacgacgaccaccgggggatcgaactcgagctcaacttccggtcgcgccaggaaatc
ctcgatctcaccaaccgctgcgactatgggccccagtcctcgaaacggctccgcgaggtc
gggcggactcctggtgagtaccgaacggagagcgacccgacggcaggtcacgaaacgggt
actgaaccggacgaagaccgaccggatcgcgtcgtcaagatcgagagcgatgagctcggc
ccgtcgccggcggatcaggtcgcgaccaccgtctcgaggctgctgaacggcgaagccgaa
aacgttccccggcgctcgctcgaggacatcgcggtcatcgtccgcacgaatcgccacgcg
caggccgtcgccgacgagcttcgagagcgacggatcccctacgagatctccggctcgccg
cggggcgagatcgaccccgggattcggacgctcatttcgtatctccgggtcctcgtcgat
cccgacgccgacgcgcacctccggcgcgtgctgctctaccggtaccggctctccgaggct
gacctcgcgacgctgcagcgcgcggacggctcactgtacgacgccgtgatgagaatcggt
tcggccgaggaagtcgagtccacggcgctcgaggaccccgatcgcatccgacgggcacgc
gaccacctcgcggaactcgaggacgtacgtgacgtctacccgctgtcggggttcgtccag
cggttccgcgaggtgacccgcctcgagtggttcctcaccggcgaggagcgcgaggaactc
gagcggatcgagcggttcgtcgacgcctacaccggggactcggtgatcgggacgctgacg
ccgtcgttcgtcgacgcgctcgagcgaacccttcagggcgggggcggcgagcgaacgcgt
ggcacccagtcctcggattcggtcgacgtgatgaccgtccaccaggcgaagggcctcgag
ttcgacaccgtcctcgtcccctacctctccgacgaggagtggtgcgtcgagcgcgactac
gcgcaacgagcgcgctaccggctgctcgcggcgacgctcgacgacgagatcgagtcgccg
ctgctggccgacctcgcgaccgaaaccgtcggcgaggagtggcgcgtgctccacgtcgcg
ctcacccgggccgagaaccacctgttcgtcttcgggagcgagtacgactacgacggcgac
gaggacgaactcggctgtgcgaccgccgacgcctgtctctccgacgacatcgagtggtcg
gtcgccggcgagcggatggagctgtggtcgtcgctccgcgcgagcttcgagcgggtgcgc
gagacctaccccgagaccgtcatcgaccgaaccgacgaactcgcggccgcggccagcgtc
gatccggggacgatcacctactacgccggctacgacgatcgatacgtcgagcccctcgag
acgcgggacgcaatcgagaccgtccaccggctggggcggctgctccgcggggagacgctg
ttgccggccgccgacgcggcgagtcacggactcgagaccggcggtagcggtggactcggt
atggccaacgagaccggcccgaacggcgaggcggatccgagccggcaggtcccgaccggc
cgtcggctctccgcgctgacgagcgacaccgtccggttccccgtcgaaacgctctcgaac
gcgacgacgctgccggtcgcgctccgccacagctacactgctctcgagactcacgatact
tgtccgcgcaaacactacctcgatcacgtcgtgcgggcgttcgacgatccgacgacgggc
gtcggcgaaacgacagcgcgaccggagccggacgcggcggcggaccgaccgctcgagtcc
ggctcccggctcgtcggcaccgtcttccacgacgtcgcggaggaggcgttctaccgcgag
taccgaacccgcgaggcgtggcgcgaggctgccgtccgccaactcaccgcgcgggactta
ctcgagtaccgcgagggcgtcctgggctgtatcgatcggttcttcgaggccgacgcggcc
gactacgacgcgccggtcgccgactgggagccggtggccgcggagctccccttctcgctc
gaggcggtcgccgacgtgaccggcgacgtcgtgggatatatcgactcgatccggcggacg
cccgacggcgaggtgacggtactcgactacaaggcgacggccgagcggatcgcgccggcc
gacgccacgcaactggcgctgtacgcccgcgcctgcgagcagcggttcgacgagccggtg
tcggcagtcggctacgtctacgtgagcgaggccgtcggaccgcgcgttgacctgctcgac
gcggacgagctgcccccgtggccggccgtccgcgagcggctcgcggcggtcgacgatccc
tccttcgaggagacgacgccgggcgaccactgccggaactgtccccaccgatcgctcggc
tgcgggccggacgacctcgagacctcgagcgacgactga
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