Haloterrigena salifodinae: JMJ58_12945
Help
Entry
JMJ58_12945 CDS
T07070
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
hsal
Haloterrigena salifodinae
Pathway
hsal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JMJ58_12945 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsal03400
]
JMJ58_12945 (uvrA)
DNA repair and recombination proteins [BR:
hsal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JMJ58_12945 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JMJ58_12945 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_23
AAA_15
AAA_22
ATPase
RsgA_GTPase
AAA_21
DnaJ_CXXCXGXG
nSTAND3
AAA_14
cobW
NACHT
YwpF
DUF87
Motif
Other DBs
NCBI-ProteinID:
QRV13858
UniProt:
A0A8T8DW97
LinkDB
All DBs
Position
complement(2658394..2661357)
Genome browser
AA seq
987 aa
AA seq
DB search
MSKDYIEVRGAEEHNLKDLDVTIPREEFTVVTGLSGSGKSSLAFETIYAEGQRRYIESLS
AYARNFLGQMDKPQVETVEGLSPAISIDQKNAANNPRSTVGTVTELHDYLRLLYARVGTP
HCPECGREVGEQSAQNMVERILELPEGTKVKLAAPVVRDQKGAFEDLFEELVSEGYARVE
IDGEEHDLTLDDPDLDENFDHTVDVIVDRVKVSAADRPRIIDSVETALDEAEGVLKVILP
DAPKDVASDLGDAARRTGALGDETEEDDRFVVEFSKDLACTHCGIDVPEIETRSFSFNSP
HGACPECEGLGETKEVDEGLVVQDESKPLKHVFEAWSYNRSYYRTRLDAVAEHFGVSLST
PFEELDEDVQQAFLYGTDGEVVFKRSTKNGTRRKRKRFEGVIPNLERRYVETDSDSTRDH
IEDYMSATECPACDGTRLKAASRAVLVDETAITEINAMSIGDALEHFESMEADLTEREKV
IAEEILKEIRARLGFMCEVGLDYLTLDREAATLSGGESQRIRLATQIGSGLVGVLYVLDE
PSIGLHQRDNDRLLDTLEELRDLGNTLIVVEHDEETMRRADQVIDMGPGPGKRGGEVVAN
GPVEEVKATEGSVTGEYLSGRRQIPVPDERRDADGALTIRGARQHNLDDVDVDIPLSNFT
AITGVSGSGKSTLMHEVLYKGLAREMNDNTSVIPGDHDALEGLEEIETVRLIDQSPIGRT
PRSNPATYTNVFDYIRKLFAQTKLAKQRGYEKGRFSFNVKGGRCEECGGQGTVKIEMNFL
SDVYVPCEECDGARYNDATLDVTYKGKTIADILEMEVEEAYEFFESSSQIRRRLKLLKDV
GLDYMKLGQPSTTLSGGEAQRIKLAEELGKKDTGETLYLLDEPTTGLHSEDERKLIDVLH
RLTDNGNTVVVIEHELDLVKNADHIIDLGPEGGENGGEIVATGTPEEVARLDDSHTGRYL
RDLLPKVDIEGPRGERVEPVTAPMDDD
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggactacatcgaggtgcggggcgcggaggaacacaacctcaaggacctcgac
gtcaccattccgcgcgaggagttcaccgtcgtcaccggcctgtcggggtcgggcaagtcc
tcgctggcgttcgagacgatctacgccgagggccagcggcggtacatcgagagcctctcg
gcgtacgcccggaacttcctcgggcagatggacaagccgcaggtcgagaccgtcgaaggc
ctctccccggcgatctcgatcgaccagaaaaacgccgcgaacaacccgcgatcgacggtg
gggaccgtcacggaactccacgactatctccgtctcctctacgcccgcgtcggcacccct
cattgtcccgaatgcggccgcgaagtcggcgaacagtcggcccagaacatggtcgagcga
atcctcgagctccccgagggcacgaaggtcaagctagcggcgccggtcgtccgcgaccag
aagggcgcctttgaggacctcttcgaggaactcgtctcggaggggtacgcccgcgtcgag
atcgacggcgaggaacacgacctcacgctggacgatcccgatctggacgagaacttcgac
cacaccgtcgacgtcatcgtcgaccgcgtgaaggtctccgcggcggaccgcccgcgcatc
atcgacagtgtcgaaaccgcgctcgacgaggccgagggggtcctgaaggtcatcctgccg
gacgcgccgaaggacgtcgcgagcgatctgggcgacgcggcccgccgaacgggcgccctg
ggcgacgagaccgaggaggacgaccgcttcgtcgtcgagttctcgaaggacctcgcctgt
actcactgcggaatcgacgtccccgagatcgagacccgctcgttctcgttcaactcgccc
cacggcgcctgtcccgagtgtgaagggctgggcgagaccaaggaagtcgacgagggtctc
gtcgtgcaggacgagtccaagccgctcaagcacgtcttcgaggcctggagctacaaccgg
tcgtactaccgaacccgcctcgacgccgtcgccgagcactttggcgtctcgctgtcgacg
ccgttcgaggagttagacgaggacgtccagcaggcgttcctctacggcaccgacggcgag
gtcgtgttcaagcggagcacgaaaaacggcacccgccggaagcgcaagcgcttcgagggc
gtcattccgaacctcgagcgccggtacgtcgagaccgactctgactcgacgcgagaccac
atcgaggactacatgtccgcgacggagtgtccggcctgtgatggcacgcggctgaaggcc
gcgagtcgggccgtgctcgtcgacgagacggcgatcaccgagatcaacgcaatgagcatc
ggcgacgccttagaacacttcgaatcgatggaggccgacctcaccgagcgcgagaaggtc
atcgccgaggagatcttaaaggagatccgcgcgcgactcggctttatgtgcgaggtcggg
ctggactacctcacgctcgaccgggaggccgcgacgctgtcgggcggggagagccagcgc
atccgcctcgccacgcagatcggctccggcctcgtcggcgtcctctacgtgttagacgag
ccctcgatcgggctccaccagcgggacaacgaccgcctgctcgacaccttagaggaactg
cgggacctcggaaacaccctcattgtcgtcgaacacgacgaggagacgatgcgccgggcg
gaccaggtcatcgacatgggacccggtccgggcaagcgcggcggcgaggtcgtcgccaac
ggccccgtcgaggaggtcaaggcgaccgagggctccgtgacgggcgagtacctctccggc
cgccggcagattccggtccccgacgaacgccgcgatgcggacggcgcgctgacgatccgg
ggcgcccgccagcacaacttagacgacgtggacgtcgacattccgcttagcaacttcacg
gcgatcacgggcgtctccggctccgggaagtcgacgctcatgcacgaagtgctctacaag
gggctggcccgcgagatgaacgacaacacgtcggtcatcccgggcgaccacgacgccctc
gagggcctcgaggagatcgagaccgtgcggctgatcgaccagtcgccgatcggccgtacg
ccccgctcgaacccggcgacgtacaccaacgtcttcgactacatccgcaagctgttcgct
cagacgaagctggcgaaacagcgcggctacgagaagggacggttctccttcaacgtcaag
ggcggccgctgcgaggagtgtggcggacagggtacggtgaagatcgagatgaacttcctc
tccgacgtgtacgtcccctgtgaagagtgcgacggcgcccgctacaacgacgccacgctc
gacgtcacctacaaaggcaagaccatcgccgacatcctcgagatggaagtcgaggaggcc
tacgagttcttcgagtcctcgagccagatccggcggcgcctgaagctgctgaaggacgtc
ggcctcgactacatgaagctcggccaaccctccacgacgctgtcgggcggcgaggcccag
cggatcaagctcgccgaagagttggggaagaaggacacgggcgagacgctctacctgctc
gacgagcccaccaccggactccacagcgaggacgagcgcaagctcatcgacgtgctccac
cggctgaccgacaacggcaacaccgtcgtcgtcatcgagcacgaactcgacctcgtcaag
aacgccgaccacatcatcgatctcggccccgagggcggcgagaacggcggcgagattgtc
gcgacgggaacgccggaggaggtcgcgcgactcgacgactcccacaccggtcgctacctg
cgcgatctgctcccgaaggtcgacatcgaggggccccgcggcgagcgcgtcgaacccgtg
acggcgccgatggacgacgactga
DBGET
integrated database retrieval system