Haloterrigena salifodinae: JMJ58_13470
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Entry
JMJ58_13470 CDS
T07070
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
hsal
Haloterrigena salifodinae
Pathway
hsal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hsal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JMJ58_13470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsal03400
]
JMJ58_13470
Enzymes [BR:
hsal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
JMJ58_13470
DNA repair and recombination proteins [BR:
hsal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JMJ58_13470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Gp22
Motif
Other DBs
NCBI-ProteinID:
QRV13950
UniProt:
A0A8T8DXK6
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All DBs
Position
2747583..2748452
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AA seq
289 aa
AA seq
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MKVGAHVSISGSRVSSDDETPPYDDLRNAVHRQRAFGGNCGQIFTTSPQVWAQPEISDDA
ADGFREESDERLEGPWVIHSAYLVNLCTPKDDLRRKSKESMQAELDAAEKLGIPYVNVHL
GAHTGAGVEGGLDNAASLIDELDVPEDVQILIESDAGSGTKLGGEFEHLAGIIDRTETDI
GICIDTAHTLVAGNDLTTPEAVDETVGRFDDEVGLEYLEYIHLNDSKHDVGTHKDEHALI
GEGYIGEDGMKAIVNHSDLRDLPFALETPTEDGKGFAWNIEKVKELRDA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcggcgcacacgtatccatctccggctcgcgcgtctcttccgacgacgaaacg
ccgccgtacgacgatctccgcaacgcggtccaccgccagcgcgcgttcggcgggaactgc
ggacagatcttcacaacctcgccgcaggtctgggcccagcccgagatcagcgacgacgcc
gccgacggcttccgcgaggaatcggacgaacgactcgaggggccgtgggtgatccactcg
gcctatctggtcaacctctgtaccccgaaggacgacctccggcgcaagtccaaagagagc
atgcaggcggaactcgacgccgccgagaaactgggcatcccgtacgtcaacgtccacctc
ggcgcgcacacgggcgcgggcgtcgagggcggcctcgacaacgcggcgagtctcatcgac
gaactcgacgttcccgaggacgttcagattctcatcgaatccgacgccggcagcgggacc
aagctcggcggcgagttcgagcacctcgcggggatcatcgaccgcaccgagaccgacatc
ggcatctgcatcgacaccgcccacacgctggtcgccggcaacgacctcacgacgcccgaa
gcggtcgatgagacagtcggacggttcgacgacgaggtcggcctcgaatatctcgagtac
atccacctcaacgactcgaaacacgacgtcggcacgcacaaggacgaacacgcgctcatc
ggcgagggttacatcggcgaggacggcatgaaagccatcgtcaaccattcggatctgcgg
gatctgcccttcgcgctcgagacgccgacggaagacgggaaaggcttcgcctggaacatc
gagaaggtcaaggaactgcgagacgcgtaa
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