Haloterrigena salifodinae: JMJ58_18020
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Entry
JMJ58_18020 CDS
T07070
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hsal
Haloterrigena salifodinae
Pathway
hsal04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
JMJ58_18020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsal03019
]
JMJ58_18020
03009 Ribosome biogenesis [BR:
hsal03009
]
JMJ58_18020
04131 Membrane trafficking [BR:
hsal04131
]
JMJ58_18020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsal04147
]
JMJ58_18020
Messenger RNA biogenesis [BR:
hsal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
JMJ58_18020
Ribosome biogenesis [BR:
hsal03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
JMJ58_18020
Membrane trafficking [BR:
hsal04131
]
SNARE
SNARE associated proteins
Others
JMJ58_18020
Autophagy
Aggrephagy
Other aggrephagy associated proteins
JMJ58_18020
Exosome [BR:
hsal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JMJ58_18020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
CDC48_2
RuvB_N
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
IstB_IS21
RNA_helicase
AAA_28
Mg_chelatase
AAA_7
AAA_lid_PRS2_C
AAA_18
AAA_17
ABC_tran
AAA_3
DUF815
Sigma54_activat
NB-ARC
AAA_24
Parvo_NS1
ATPase
AAA_30
TsaE
SLFN-g3_helicase
AAA_11
Vps4_C
PhoH
NACHT
IPT
DUF6985
Harpin
Motif
Other DBs
NCBI-ProteinID:
QRV14794
UniProt:
A0A8T8DYX7
LinkDB
All DBs
Position
complement(3618338..3620569)
Genome browser
AA seq
743 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGADTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEATKADKLTLAPPEEASVQFGSDAAGMVKRQIL
KRPVVGRDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVVLITEDTDVELREEPISGFE
KTGGGITYEDIGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEV
GREEILQIHTRGMPLSDDVDLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIVKRQDFRGALNEVEPSAMREVLVELPKISWNDVGGLHSAKEQVQESVEW
PLSNPERFDRLGVDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDALAPGRGGETGSNVSERVVNQLLTELDGLEEMENV
MVIGATNRPDMIDPALLRSGRFDRLVMIGEPDVDGRERILEIHTENTPLAADVTLREIAE
ITDGYVGSDLESIAREAAIEALREDEEADIVEMRHFRQAMENVRPTITDDILDYYEQIEE
EFQGGGSGGPGPTGRRDSRIGFQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagttcaactggaggttgcgaaggcgtacccgaacgactcgggtcgtggtatc
gcccgactcgacccggacacgctgttgcatctgaagctgagtccgggcgacatcatcgaa
atcgaaggcgccgacaccaccgccgcgaaggtgtggcgcgccgaccggcaggactggaac
accgatacggtccgcatcgacgggttcacccgtcagaacgccgacgtggggatcggcgaa
cgcgtaacgatccgcaaggcagaagctacgaaggcggataagctcaccctcgcacccccc
gaggaggcgtcggtccagttcggttccgacgccgccggcatggtgaaacgacagatcttg
aagcggccggtcgttggtcgcgacatcgtcccggtcatgtcctcgacgaaccatccgttc
atgcggtcgcccggccaggcgattccgctcatcgccgtcgagacggaacccgagggcgtg
gtcctcatcaccgaggacaccgacgtcgagcttcgcgaggagccaatttcgggcttcgag
aagaccggcggcggcattacctacgaggacatcggcgggctccagagcgagatccagcgg
gtcagggagatggtcgaactcccgatgaaacacccgcagatcttcaagaagctcggcatc
gagcccccgcagggcgtcctgctccacgggccgccgggcaccgggaagaccctactcgcg
aaggccgtcgccaacgagacctccgcgagcttcttctcgatcgcggggccggagatcatc
tcgaagtactacggcgagtccgaacagcagttacgggagatcttcgaggacgcgaccgag
gagtcgccgtcgatcatcttcatcgacgaactcgactccatcgcacccaaacgggaggac
gtcaccggcgaggtcgagcgccgcgtcgtcgcccagttgctgactatgatggacggtctc
gagtcccgcggtcaggtcatcgtcatcgcggcgaccaaccgcgtggactcggttgacccc
gcactgcgccggccgggccggttcgaccgcgagatcgagatcggcgtcccggacgaagtc
ggccgcgaggagatcctccagattcacacccgtgggatgcccctctctgacgacgtcgac
ctcggccacctggccgacgagacccacggcttcgtcggcgctgacatcgagtcgctgacg
aaggaagccgcgatgaaggccctgcgccggtaccttcccgagatcgatctcgacgaggag
gacatcccgccgagcctaatcgaccggatgatcgtcaagcgccaggacttccgcggcgcc
ttgaacgaggtcgagccctcggcgatgcgggaggtgctcgtcgaactcccgaaaatctcc
tggaacgacgtcggcggcctccactccgccaaggagcaggtccaagagtccgtcgagtgg
cccctctcgaaccccgagcggttcgaccggctgggggtcgatccgccagccggcgtcttg
ctgtacgggccgccgggcaccgggaagacgctcatggcgaaagcggtcgccaacgagacc
aacgcgaacttcatctcggtgcgcggcccgcaactcctctcgaagtgggtcggcgagtcg
gagaaggccatccggcagaccttccgcaaggcgcggcaggtctcgccgacggtgatcttc
ttcgacgagctcgacgcgctcgcgccggggcggggcggtgaaaccggctcgaacgtctcc
gagcgagtcgtcaaccagctcctgacggaactcgacgggctcgaggagatggagaacgtg
atggtcatcggcgcgaccaaccgaccggacatgatcgaccccgcgctgctgcgctcgggg
cggttcgaccggctggtcatgatcggcgaacccgacgtcgacggccgcgaacgcatcctc
gagatccacaccgagaacacgccgctggccgcggacgtcacgctgcgcgagatcgccgag
atcaccgacggctacgtcggcagcgacctcgagtcgatcgcccgcgaggcggccatcgag
gcgctgcgcgaggacgaggaggccgacatcgtcgagatgcgccacttccggcaggccatg
gagaacgttcggccgacgatcacggacgacatcctggactactacgagcagatcgaagag
gagttccagggcggtggatcgggcggccccggaccgacgggtcgccgcgacagtcggatc
ggcttccagtaa
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