KEGG   Haloterrigena salifodinae: JMJ58_19900
Entry
JMJ58_19900       CDS       T07070                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hsal  Haloterrigena salifodinae
Pathway
hsal03030  DNA replication
hsal03410  Base excision repair
hsal03420  Nucleotide excision repair
hsal03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hsal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JMJ58_19900
   03410 Base excision repair
    JMJ58_19900
   03420 Nucleotide excision repair
    JMJ58_19900
   03430 Mismatch repair
    JMJ58_19900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsal03032]
    JMJ58_19900
   03400 DNA repair and recombination proteins [BR:hsal03400]
    JMJ58_19900
Enzymes [BR:hsal01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     JMJ58_19900
    6.5.1.6  DNA ligase (ATP or NAD+)
     JMJ58_19900
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     JMJ58_19900
DNA replication proteins [BR:hsal03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    JMJ58_19900
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     JMJ58_19900
DNA repair and recombination proteins [BR:hsal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     JMJ58_19900
   NER (nucleotide excision repair)
    Other NER factors
     JMJ58_19900
   MMR (mismatch excision repair)
    Other MMR factors
     JMJ58_19900
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-ProteinID: QRV15143
UniProt: A0A8T8E0U0
LinkDB
Position
complement(3974472..3976238)
AA seq 588 aa
MEFATFADRAAAIEAEPADLEIVARTSELLADAGDDSEDRRSAGSAVDPQTVEIVARFVQ
GRVFPAWDSTKLDIGPTTCYEAIARAAGTNVSGDDVEERLAEVGEIGEVAAGYDFGGQQG
LGVFTGGGGNGGGGAGENDLTVREVYETLADLAAAEGSGSQDRKVDLLFGLFNRCSSEEA
CYLARLVLSEMRIGVGEGTVRDAIAEAFDVPVERVERALQVSNDYGQVARVARDEGREGL
DELDLEVGRPVQAMLAQAGTVTDALEEWDEAAVEWKYDGARIQLHYDPEAAEADAETRVF
SRNMEEVTDALPEVAEFAEATLEEPAILDGEVVAIDENDDPLPFQEVLKRFRRKHDVAKA
REDVTVRPVFFDCLHAGGEDLLAESLTTRHERLRTVLADGESLEQDEDDIEGLSLLWTTD
DPDEIEVIDADALEAGHEGIMLKDPDSAYSPGRRGKHWRKRKPDVETLDCVVTGAEWGEG
RRATFLGTFELSVRAGDDLETVGKVATGITDEKLEELTELLEPHIAAEEGQAVDIEPAIV
FEVGYEEIQSSPTYSSGYALRFPRFLSVRSDKNPEDADTLERVERLRA
NT seq 1767 nt   +upstreamnt  +downstreamnt
atggagttcgccacgttcgccgaccgcgccgccgcgatcgaagccgagccggccgacctc
gagatcgtcgctcgaaccagcgagttgctcgcggacgcgggcgacgacagcgaggaccga
cgttccgctggctctgcggtggatccgcagaccgtcgagatcgtcgcccggttcgtccag
ggacgcgtcttcccggcctgggactcgacgaaactcgacatcggcccgacgacgtgctac
gaggcgatcgcccgcgcggcggggacgaacgtgagcggcgacgacgtcgaggagcgactg
gccgaggtcggcgagatcggcgaggtggccgccggctacgactttggcggccagcagggt
ctgggcgtgttcaccggcgggggcggaaacggtggcggcggtgccggcgagaacgatctc
accgttcgcgaggtctacgagacgctcgccgacctcgccgccgcggaggggtcgggcagt
caggaccgcaaggtcgacctgctgttcggcctcttcaaccgctgctcgagcgaggaggcc
tgctacctcgcgcgactcgtcctctcggagatgcggatcggcgtcggcgagggcaccgtc
cgggacgcgatcgccgaggccttcgacgtccccgtcgagcgcgtcgagcgcgccctgcag
gtctcgaacgactacgggcaggtcgcccgcgtcgcccgcgacgagggccgcgagggactc
gacgaactggacctcgaggtcggccgacccgtccaggcgatgctcgcccaggcggggaca
gtgaccgacgcgctcgaggagtgggacgaggccgccgtggaatggaagtacgacggggct
agaatccagttgcactacgatcccgaggccgccgaggcggacgccgagacccgcgtcttc
tcgagaaacatggaggaagtcaccgacgccctccccgaagtcgccgagttcgccgaggcg
accctcgaggaacccgcgattctggacggcgaggtcgtcgcaatcgacgagaacgacgat
ccgctcccgttccaggaggtgctcaagcgcttccgccggaaacacgacgtcgcgaaggcc
cgcgaggacgtgacggtgcgaccggtcttcttcgactgcctgcacgccggcggcgaggac
ctgcttgcggagtcgctgacgacgcgccacgagcggctgcggacggtgctggcggacggc
gagtcgctggagcaggacgaggacgatatcgagggactctcgctactctggacaaccgac
gatcccgacgagatcgaggtgatcgacgccgacgcccttgaggcgggccacgaggggatc
atgctcaaggaccccgactcggcgtactcgccgggccggcggggcaaacactggcgcaag
cgcaaacccgacgtggagacgcttgactgcgtggtgaccggcgcggaatggggcgagggt
cggcgcgcgacgtttttgggcaccttcgagctctccgtgcgcgcgggcgacgacttggag
accgtcggcaaggtcgcgacgggtatcaccgacgagaaactcgaggaactcacggaactc
ctcgagccccacatcgccgccgaggagggccaggcggtggacatagagcccgcgatcgtc
ttcgaggtcggctacgaggagatccagagctcgccgacctactcgtcgggctacgcgctt
cgcttcccgcggttcctcagcgttcgctccgacaagaaccccgaggacgcggacacgctc
gagcgcgtcgaacggctgcgagcgtag

DBGET integrated database retrieval system