Haloterrigena salifodinae: JMJ58_20975
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Entry
JMJ58_20975 CDS
T07070
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hsal
Haloterrigena salifodinae
Pathway
hsal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JMJ58_20975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsal03021
]
JMJ58_20975
Transcription machinery [BR:
hsal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
JMJ58_20975
Prokaryotic type
Archaeal type
TFB
JMJ58_20975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HypA
Cyclin_C
HTH_Tnp_ISL3
HTH_Crp_2
TFIIB_C_1
Cas12f1-like_TNB
DZR
RB_B
DZR_2
Motif
Other DBs
NCBI-ProteinID:
QRV17431
UniProt:
A0A8T8E7U4
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All DBs
Position
pHTS138:18909..19832
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AA seq
307 aa
AA seq
DB search
MATRDIYTTAFDEDVQTTATGCPDCGGSVRTTGRETVCEDCGLILEDTHLDRGPDWGRHD
AQGSEKRTGAPLTPTRHDRGLSTEIGYKQDGHGNALSSTKRRQLNRLRREQSRAQWQSKA
ERNLAYGLGEIRRIVASLGLAESIRDQACSLFRTAQSEQLCRGRSLEAVAAASVYATTRC
NGLGRARSEVAACARCDQQRLTNAYTAMNVELELPTQPIAATDRIPRLATALEVPNHVRR
RALDLAQTARERGLTIGCRPSGVAAGCLYLAAQRVGLCLSQQRIADIAGTSPNTLRNRRD
ELLEIDT
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgagagacatctacacgactgcgttcgacgaagacgtccagacaactgcaacc
ggttgcccggactgtggtggcagcgttcgaacgactggccgtgagacagtttgcgaggat
tgtggactcatcctcgaggacacccacctagaccgagggcctgactgggggcgacatgac
gcacagggatccgagaagcggactggcgccccactgacaccgacacgccacgatcgcggc
ctctccaccgagattgggtataagcaagacggacatggaaacgccctctcgagcacaaag
cgccgacagttgaaccggctgcgtcgcgaacagtcccgtgcacagtggcagtcgaaagct
gaacggaacctcgcctatggactcggcgaaatccgacggatcgtcgcgagtctcggcctc
gcagagagtatccgtgatcaggcgtgttcgctgttccgaactgcacagtccgaacagctc
tgtcgcggacgatcactcgaggcggtggctgcagccagtgtctacgcaaccactcggtgt
aacggactcggacgagcgcggtcagaagtcgcagcctgtgcacgctgtgatcaacagcga
ctcaccaacgcctacaccgcgatgaacgtcgaactcgagttaccgacacagccgattgca
gcaacggatcggattccgagacttgcgacagcactcgaggttccgaaccacgtgcgacga
cgagcactcgacctcgcacagacggcgcgcgaacgcggactgacgattggttgccggccg
agcggcgtcgcagcgggctgtctctatctcgctgcccagcgagtcggcttatgtctctct
caacaacggatcgccgatatcgcaggaacatcgccgaacacgctccgcaatcggcgagac
gaattactcgagatcgatacctga
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