Haloterrigena salifodinae: JMJ58_21705
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Entry
JMJ58_21705 CDS
T07070
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hsal
Haloterrigena salifodinae
Pathway
hsal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JMJ58_21705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsal03021
]
JMJ58_21705
Transcription machinery [BR:
hsal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
JMJ58_21705
Prokaryotic type
Archaeal type
TFB
JMJ58_21705
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DZR_2
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
QRV17598
UniProt:
A0A8T8E796
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All DBs
Position
pHTS171:complement(43461..44417)
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AA seq
318 aa
AA seq
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MTRSIIDHTTSESTETETGLCPDCETDTIVHDPDRGERVCEECGLVLTEDPIDYGPEWRA
FNAQEHDELSRVGAPLTQSMHDRGLTTTIDWRNKDANGHSMSADKQGQLHRLRVWQERIR
TKNAGERNLKYALSEIDRMVSALGVPKPVKETASVIYRRALEQDLIRGRSIEGVATSALY
TACRKEDIPRSLEEVTSVSRVDQREIGRTYRYIADELDINLEPTNPRQFVPRFCSELDVG
KDVETKAVEIIDQTTEQGLHSGKSPTGFAAAAIYAAGLLCDETIPQRAVADTAQTTVVTV
RNRYREQLEAIDQQPATT
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggtccattatcgatcacaccacgagcgaatcaaccgagacagagaccggtcta
tgtccggactgcgaaaccgatacgatcgtccacgacccggaccgcggcgagcgagtctgc
gaggagtgcgggctcgttctgaccgaagatccgatcgattacggccccgaatggcgagcc
ttcaacgcccaggaacacgacgagctctcccgcgtcggcgcgccgctgacccaatcgatg
cacgatcgggggctgacgacgaccatcgactggcgcaacaaggacgccaacggccactcg
atgtcggccgacaaacagggccagctccaccgactccgcgtctggcaggaacgcatccgc
acgaaaaacgccggcgaacgcaatctgaagtacgcgctctcggaaatcgaccgcatggtc
agcgcgttaggcgttccaaagcccgtcaaagagactgcaagcgtcatttaccgacgcgcg
ctcgagcaggacctcattcgcggccggtcgatcgagggcgtcgccaccagtgcgctgtac
acggcctgtcgtaaggaggacattccgcggagcctcgaggaagtaacctccgtctcccgg
gtcgaccagcgggagatcggccggacgtatcggtatatcgccgacgaactcgatatcaac
ctggagccgacgaatccgcgccagttcgttccccgcttctgttctgaactcgacgtcggc
aaggacgtcgagacgaaggccgtcgaaatcatcgaccaaacgaccgagcagggtctgcac
tcgggaaagtcgccgaccggcttcgccgccgccgccatctacgcggccgggttgttgtgc
gacgagacgatcccccagcgggccgtcgccgacaccgctcagacgaccgtggtcacggtt
cggaaccggtaccgcgagcaactcgaggcgatcgaccaacagccggcgacgacgtga
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