Halobacillus salinarum: MUN89_01180
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Entry
MUN89_01180 CDS
T09487
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
hsan
Halobacillus salinarum
Pathway
hsan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hsan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MUN89_01180 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsan03021
]
MUN89_01180 (rpoC)
03400 DNA repair and recombination proteins [BR:
hsan03400
]
MUN89_01180 (rpoC)
Enzymes [BR:
hsan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MUN89_01180 (rpoC)
Transcription machinery [BR:
hsan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MUN89_01180 (rpoC)
DNA repair and recombination proteins [BR:
hsan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MUN89_01180 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
UOQ44626
UniProt:
A0ABY4EKK5
LinkDB
All DBs
Position
complement(201458..205066)
Genome browser
AA seq
1202 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTKAKVRRERMGHLELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFAAYIVTDPGETALERKQLLSEKEYRSYREKYGQGFQAAMGAEAIRKLLF
DIDLDGEVDALKEELKVAQGQRRTRAIKRLEVLESFRNSGNDPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPTIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPSLKMYQCGLPKE
MALELFKPFVMKELVSRGLAHNIKSAKRKIERVHPEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERVDAVGEGMSFKDLNEALMAYQNGYVHLHTRVAVQ
ASSLDNETFTEKQNQQLLLTTVGKLIFNEMLPNSFPYINEPTQENLEIKTPDQYFVEPGT
NIRETIAERDEVSPFKKGILGDIIAEVFKRFSISETSKMLDRMKDLGFAYSTKAGITVGV
SDVVVLPEKQEILDEAQGKVDKVLKQFRRGLITEEERYDRVIEVWSSAKDDIQDRLMKSL
DPRNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLPVSALSEGSEVIEPLI
DRLIGRTAFQTIKHPETGQVLATRNEVIFEDAAKQIVDAGIEEVVIRSAFTCNTKHGVCK
KCYGRNLATGDEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIV
EARNPKGQAVITEIDGTVQEVNEVKEKQEIVVQGSVETRSYTAPYGARLKVSVGDEVVAG
APLTEGSIDPKELLTVQGLDGVQEYLLKEVQKVYRMQGVEISDKHVEVMVRQMLRKIRVL
DSGDTDVLPGSLLEIHQFKEANQKALMEGGQPAVGRPVILGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMTRYRKIQAKSEQTDDVIEPAEQVT
QP
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtaaataattttgaatatatgaaaataggcttggcttcaccagataagatt
cgttcttggtcgtatggtgaggtgaagaagccggagacaattaactatcgtacgttaaag
cctgagaaagacgggttgttttgtgaaagaatcttcgggcctcagaaagactgggaatgt
cattgcggaaaatacaagcgtgtccgttacaaaggtgtcgtttgtgaccgctgtggggta
gaagtaacgaaagcaaaagtacgtcgtgagcggatggggcacttagaattagctgcccct
gtctctcacatttggtatttcaaaggtataccgagccgcatggggttagtactcgatatg
tccccgcgtgccttggaggaagtcatttattttgctgcgtatatcgtgaccgatccaggg
gaaactgcgcttgagcgcaagcagcttctttcagaaaaagagtatcgctcttaccgggag
aagtatggccaaggttttcaggcagctatgggagcagaagcaatccgtaaactgcttttt
gacatcgatctcgatggcgaagtggatgcacttaaagaggaattgaaagtagcccaaggt
cagcgccgtacccgtgcgattaagcgtcttgaggtacttgaatccttccgtaactctgga
aatgacccatcttggatgatcctggatgtactgcctgtcatccctccagagcttcgcccg
atggttcagctggatggtggacgttttgccacctctgatttaaatgacttgtaccgtcga
gtcattaatcggaacaatcgtctgaagcgtcttcttgacttaggagcgcccacgattatc
gtccagaacgagaagcgtatgcttcaggaagctgtcgacgctcttatcgataacggccgc
cgcggtcgtccggttacaggaccaggaaatcgtcctcttaagtctctttctcatatgctg
aaagggaagcaaggacgtttccgtcaaaacttgctcggtaaacgtgtagactattctggt
cgttccgttatcgtagtaggaccgtccctcaagatgtaccaatgtggtcttcctaaagaa
atggcgcttgaattatttaagccgtttgttatgaaagaactcgtttcccgcggtttagct
cataatattaagtcagcgaagcgcaaaattgaacgtgtacaccccgaagtctgggacgta
cttgaagatgtaatcaaagaacaccctgttcttttaaatcgtgcaccaacactgcaccgt
ttagggattcaagcctttgaaccaacacttgttgagggaagggcaatccgtcttcacccg
ctcgtatgtacagcttataatgccgactttgatggtgaccaaatggctgtgcacgtgccg
ttgtcttctgaagcacaagcggaagcaagaatcctgatgctggctgcgcagaacatccta
aaccctaaagatggtaaaccagttgttactccatcacaggatatggttcttggtaactac
taccttactcttgagcgtgtagacgcagtcggagaaggaatgagctttaaggatcttaac
gaggctcttatggcttaccagaatggatatgtccacttgcatacacgtgttgctgtacag
gcaagctctttagataacgaaacgtttactgaaaaacaaaaccagcagttgctgttaacg
acggttggaaagctgatctttaacgaaatgcttccaaactcgttcccttatattaatgag
cctacgcaagagaaccttgagattaaaacgcctgaccagtattttgtcgagccaggtacg
aatattagggaaacaattgctgaaagagatgaagtttcaccattcaagaaaggcatctta
ggagacattattgcagaagtgtttaagcgtttctctattagtgaaacttctaaaatgctc
gatagaatgaaagaccttggctttgcttattctacgaaagcaggtatcaccgttggggta
tccgacgttgtcgtacttcctgaaaagcaggagattctagatgaagcacaaggtaaggtt
gataaagtattgaaacagttccgtcgtggacttatcacggaagaagagcgttatgatcgt
gttattgaagtttggtccagtgccaaagatgatattcaggatcgcttgatgaaatctctt
gatccgcggaacccaatctttatgatgagtgactctggtgcgcgtggtaacgcctctaac
ttcactcagctagctggtatgcgtggtcttatggccaacccggccggccggatcatcgaa
cttccgatcaaatccagcttccgtgaaggtttaaccgtactagaatactttatttctacg
cacggtgcacgtaaaggtcttgctgataccgccttgaaaacagcggactctggttacttg
actcgtcgtcttgtagacgtagcgcaggatgtcattgtacgtgaagatgactgcggaacg
gatagaggcctgcctgtaagtgccctttctgaaggttccgaagttattgagcctttaatc
gaccgattaatcggccgtacagcgttccaaacgatcaagcatccagaaaccggtcaagta
ctggccactcgtaacgaagtaatcttcgaggatgcagcgaagcagattgtggatgcaggg
attgaagaagtagtcatccgttctgccttcacatgtaatactaaacatggcgtttgtaag
aagtgttacggacgcaacctggcaacaggggatgaagtcgaagtgggtgaagcagtcggt
attattgctgcacaatccatcggtgagccaggtactcagctaacgatgcgtacattccac
accggcggggtagcaggagacgatatcactcaaggtctaccgcgtatccaggaaattgtg
gaagcacgtaatcctaaaggtcaagccgttatcacagagattgacggtaccgtgcaggaa
gttaatgaagtgaaagaaaaacaagagattgtcgtgcaaggaagcgtggaaacacgttct
tacaccgccccttatggagcgcgtctgaaagtctctgtcggagatgaagtcgttgcagga
gctccattaacagaaggttccatcgatcctaaagaactattaactgttcaaggacttgat
ggagtccaggaatacctccttaaagaagtacagaaggtataccgtatgcaaggggttgaa
atctctgataaacacgtagaagttatggttcgccaaatgcttcgtaagatccgagtgctt
gactctggagataccgatgttcttcctggttcactgcttgagatccatcaatttaaagaa
gcaaaccagaaagctcttatggaaggcggacagcccgctgttggacgtccggttatcctc
ggaattacgaaagcatcccttgaaacagacagcttcttgtcagcagcatccttccaggag
acgactcgtgtcctgacagatgcagcaatcaagggtaaacgcgatgaactgcttggactc
aaagaaaatgttatcattggtaagcttgtcccagctggaacaggcatgactagatatcgt
aaaattcaagccaagtcagagcagaccgacgatgttatcgagcctgcagaacaagtaacc
cagccttaa
DBGET
integrated database retrieval system
