Halobacillus salinarum: MUN89_05115
Help
Entry
MUN89_05115 CDS
T09487
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hsan
Halobacillus salinarum
Pathway
hsan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUN89_05115 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsan03021
]
MUN89_05115 (rho)
03019 Messenger RNA biogenesis [BR:
hsan03019
]
MUN89_05115 (rho)
Transcription machinery [BR:
hsan03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MUN89_05115 (rho)
Messenger RNA biogenesis [BR:
hsan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MUN89_05115 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
Spore_III_AA
AAA_22
AAA_25
AAA_24
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
UOQ45331
UniProt:
A0ABY4EMP0
LinkDB
All DBs
Position
985413..986696
Genome browser
AA seq
427 aa
AA seq
DB search
MAELTISNLETMTLKNLYAKARQYKVSYYAKLTKRELIFAILKAQAEKDGFLFMDGILEI
IPSEGFGFLRPINYSPSAEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVDA
VNGEDPDSAKERVHFPALTPLYPDRQMKLETESKQLSTRIMDLMAPVGYGQRGLIVAPPK
AGKTVLLKQMANSISTNHPDAKLIILLVDERPEEVTDIERSVAPDVDVVSSTFDEVPENH
IKVAELVLERAMRLVEHKRDVIVLMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKR
FFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAID
IRRSGTRKEELLLNKPALDKIWAIRQTMTDSPDFMERFLRRLKSSKDNAEFFDLMDKDMK
GKAAAKR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaattaacaatctctaatttagagacgatgacgttaaaaaatttatatgcaaaa
gcaaggcaatataaggtttcctattatgcgaagctgacaaagcgcgagctgatctttgcg
attttaaaagcgcaggcagagaaggacggctttctatttatggatgggattctggaaatt
attccgtctgaaggcttcggttttctccgcccgattaactattctccaagtgctgaggat
atttacatttcagcctcacagatccgccgttttgatttaagaaacggggataaagtctcc
ggaaaagtacgtcctccgaaagaaaatgagcgctattacggtttgttgcacgtggatgcc
gtcaatggggaagacccggattcagctaaggaacgtgtccacttcccagcgttgactcct
ctttatcccgaccggcaaatgaaactggaaacagaaagcaaacagctctccacccgaatt
atggatttaatggcacctgtcggctacggtcagcgaggtttgattgtggctccgcctaaa
gcaggtaaaacggttttgctcaagcagatggcaaacagcatttcaacgaaccatccggat
gccaaactgattattctactcgtagacgaacgtcctgaggaagtcacggatattgagcgc
tccgttgcccctgatgtagatgtagtcagctcgacctttgatgaagtgcctgagaaccat
attaaagtggccgagctcgtccttgagcgtgcgatgcggttagtcgagcacaagcgcgat
gttattgtactcatggacagcattactcgtcttgcacgtgcttacaatctcgtaatcccg
ccaagtggaagaacgttatctggcgggatcgatccggcggcattccaccgtccgaagcgc
ttcttcggggcagccaggaatattgaagaaggtggaagtctcaccattcttgcgacggca
cttgtggatacaggctcacgtatggatgatgtcatctacgaagagtttaaagggaccggc
aacatggagctgcaccttgaccgcagcttagcggagcggagaattttccctgcgatcgat
atccgccgttccggcacgcggaaggaagagctgctgttgaataagccggctctcgataaa
atctgggcgatcaggcagacgatgaccgattccccggacttcatggaacgcttcctccgc
cgtttgaaatcttcaaaagacaacgccgaattttttgatttgatggataaggatatgaag
ggaaaagcagcggcaaaacgctga
DBGET
integrated database retrieval system
