Halobacillus salinarum: MUN89_21440
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Entry
MUN89_21440 CDS
T09487
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hsan
Halobacillus salinarum
Pathway
hsan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUN89_21440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsan03019
]
MUN89_21440
03009 Ribosome biogenesis [BR:
hsan03009
]
MUN89_21440
Enzymes [BR:
hsan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUN89_21440
Messenger RNA biogenesis [BR:
hsan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUN89_21440
Ribosome biogenesis [BR:
hsan03009
]
Prokaryotic type
rRNA helicases
MUN89_21440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UOQ46563
LinkDB
All DBs
Position
complement(4180186..4181610)
Genome browser
AA seq
474 aa
AA seq
DB search
MGFEETTPIQEQTIPLGMQGKDVIGQAQTGTGKTAAFGIPMIEKINKDLKAVQGLVIAPT
RELAIQVAEEVNRLGKNKGIRTLPIYGGSNMERQIRALRDNQIVVATPGRLLDHIRRKTI
KLENVHTAVLDEADEMLNMGFIDDIRDILKALPEHRQTLLFSATMPKEIRDIATTLMKKP
EEVKVKSKEMTVENIDQYYVEIPEKHKFDTLTRLLDIHAPALAIVFGRTKRRVDELSDGL
QARGFRAEGIHGDLTQGKRMSVLNKFKRGRIEILVATDVAARGLDISDVSHVYNFDIPQD
PESYVHRIGRTGRAGRKGESVSFVTPREKAQLHLIEKLTKKKVERLHVPSSDEAKRGQQQ
VAVDKIKETIDANDLNKYHQAADQLLQDHDASEVVAAALKLLTKERDEVPVRLTSVQPIS
VKGAQRDKNKNKKNYRKDGNRNFKRSGNNKSRNRKFNSKGKHGFQNKKRNSNVN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgaggaaaccacacccattcaagaacaaaccatcccgcttgggatgcaaggc
aaggacgtaatcggtcaggctcagacaggtactggtaagacagcagcttttggaattccg
atgatcgagaagatcaataaagatttaaaggctgttcaaggattagtcattgccccgaca
cgtgaattggctattcaggttgcggaagaagttaaccgccttggaaaaaacaaaggcatt
cgcacattaccgatttacggcggctctaacatggagcgtcaaatccgtgctttacgcgac
aatcaaattgtcgtcgcaacacctggacgtttactcgatcacatccgcagaaaaacgatt
aaacttgagaatgtgcatacagcagtattggatgaagctgatgagatgctgaatatgggt
ttcattgacgatatccgcgacattttaaaagcgttgcctgaacatcgtcaaacgctgctt
ttctcagcaacgatgcctaaggaaatccgcgatatcgccacaacgctgatgaaaaagcct
gaagaagtaaaagtaaaatcaaaagaaatgaccgttgaaaatattgaccaatactacgta
gaaatccctgagaagcataaatttgatacgctgactcgtctgcttgatattcacgcaccg
gcattagccattgtgttcggccgtacgaaacgccgtgtcgatgagttatctgacggtttg
caagcacgcggattcagagcggaagggattcacggagacttaactcaggggaaacggatg
tctgtgcttaataaatttaaacgcggccgcattgaaatcttagtagcaacagacgttgct
gcacgcggacttgatatatccgatgtttctcacgtctataactttgacattccacaggat
ccggaaagctatgttcaccgaattggccgtactggccgtgctggacgtaagggagaatca
gtctcttttgtaacaccgagagaaaaagcgcagcttcacttgatcgagaaactcacgaag
aaaaaagtggaacgtttacatgtgccttcatctgatgaagctaagcggggccagcagcag
gtagctgtagacaaaattaaagaaaccattgatgctaacgacttgaataagtaccatcaa
gcggctgatcaactgctgcaggaccacgatgcatcagaagtagtggcagcagctcttaaa
ctgctgacaaaagaacgtgacgaagtgcctgtccgcttaacttcagttcagccgatcagt
gtaaaaggcgcacagcgcgataagaacaaaaacaagaaaaactatcgtaaagatggcaat
cgtaattttaaacgcagcggcaataataaatcacgcaatcgtaaatttaatagcaaaggg
aaacacggctttcagaataaaaagcgtaattctaacgtaaattaa
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