Hymenobacter sublimis: MWH26_01950
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Entry
MWH26_01950 CDS
T09379
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hsb
Hymenobacter sublimis
Pathway
hsb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MWH26_01950 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsb03019
]
MWH26_01950 (rny)
Messenger RNA biogenesis [BR:
hsb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MWH26_01950 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
YtxH
DUF4954
KH_KhpA-B
NttC
DUF4229
KH_2
Motif
Other DBs
NCBI-ProteinID:
UPL49685
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Position
446524..448221
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AA seq
565 aa
AA seq
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MSESLYIVLAAVLALVVGVVLGRLLAGKARQDHEADAKARAQQLLAEAEAQATRTRDERI
QQSKDKFRTLKQEFEQESRRQKQALEQELTERRAAVVEQEQSIKQLTLTTQKQLEQIQRK
EKELEATREKIETQALQQREKLDAQEEKRRTVLENQLAKLEQREREVEEELEERGQELST
KLHQVTTQLENISGLTAAEAREQLVESLKNEAQIQASSYIKDVVAQAKLTATKDAKKVVL
ETIQRTAAEHAIENCVSIFNIESDDVKGKIIGREGRNIRALEAATGVEIIVDDTPEAIII
SGFDPVRREVARLSLHLLVKDGRIHPARIEEIVAKTRKNIDEEIVEIGEKTIIDLGIHGL
HPELIKMVGRMRFRSSYGQNLLQHSREVANLCATMAAELGLNVKHAKRAGLLHDIGKVST
EEPELPHAILGMEMAKKYKEHPDVVNAIGAHHDEIEMTAMISPLVQACDAISGSRPGARR
EMMESYIKRLKQLEETANGFKGVNQCFAIQAGRELRVMVDAENVTDERAAELSYEISQKI
EKEMQYPGQIKITVIREMRAVAYAK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatctctttatattgtcctggcagccgtgctggcccttgtggttggcgtggta
ctggggcgcctgctggctggcaaagcccggcaggaccacgaagccgacgctaaggcgcgc
gcccagcagttgctggccgaagccgaagcccaggccacccgcacccgcgacgagcggatt
cagcagtccaaggataaatttcgcacccttaagcaggaattcgagcaggaaagccgccgc
cagaagcaggccctagaacaggaattgaccgagcgccgcgccgccgtagtagagcaggag
cagagcatcaagcaactaacccttactacccaaaagcagctggagcagattcagcgcaag
gaaaaagagctggaagcaacccgcgagaaaatagaaacgcaggccctgcagcagcgtgaa
aagctggatgcccaggaggaaaagcgccgcacggtgctggaaaaccaactggccaagctg
gaacagcgcgagcgggaagtagaagaggagttggaggagcgcggccaggagctgagcacc
aagctgcaccaggtaaccacgcagctagagaatatttcgggtctgaccgccgccgaagcc
cgcgagcaactggtggagtcgctgaaaaacgaagctcagatccaggcttccagctacatc
aaagacgtagtagcccaggccaagctcacggccaccaaagacgccaaaaaggtagtgctg
gaaactattcagcgcaccgccgccgagcacgccattgagaactgcgtgtccattttcaac
atcgagtcggacgacgtgaagggcaagattattggccgcgaaggccgtaacatccgggcc
ctggaagcagctactggtgtggaaatcattgtggacgacacgcccgaagccatcatcatt
tccggcttcgacccggtgcgccgcgaggtagcccgcctaagcctgcacctgctggtgaag
gatggccggattcacccggcccgcatcgaagaaattgtggctaaaacccgcaagaatatt
gatgaggaaatcgtcgaaatcggcgagaagaccatcatcgacctgggcattcacggcttg
caccccgagctgatcaagatggtaggccgcatgcgtttccgctcctcttacgggcagaac
ctgctgcagcactcccgcgaggtagccaacctgtgcgctactatggccgccgagctgggc
ctgaacgtgaagcacgccaagcgcgccggcctcttgcacgacatcggcaaggtaagcacc
gaggaacccgagctgccccacgccatcctaggcatggaaatggccaagaagtacaaggag
catcccgacgtagtcaacgccatcggcgcccaccacgacgaaattgagatgacagccatg
atttcgcccctggtgcaggcctgcgacgccattagcggctcgcgccccggtgcccgccgc
gagatgatggaaagctacatcaagcgtctcaagcaactggaagaaacggccaacggcttc
aaaggtgttaaccagtgctttgctattcaggccggccgcgagctgcgcgtgatggtagac
gccgaaaacgtaaccgatgagcgcgccgcggagctgagctacgagatttcccagaaaatt
gagaaggaaatgcagtaccctggtcaaatcaaaatcacggttatccgggagatgcgcgcc
gtagcctacgccaaatag
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