Hymenobacter sublimis: MWH26_03955
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Entry
MWH26_03955 CDS
T09379
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hsb
Hymenobacter sublimis
Brite
KEGG Orthology (KO) [BR:
hsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsb03400
]
MWH26_03955 (sbcD)
DNA repair and recombination proteins [BR:
hsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MWH26_03955 (sbcD)
Archaeal homologous recombinant proteins
MWH26_03955 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
FBPase_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
UPL50071
LinkDB
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Position
complement(915893..917125)
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AA seq
410 aa
AA seq
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MRVLHTADWHLGQRFIQGHERTDEHRHFLEWLVQTVREQQVEVLVVAGDIFDTGSPSNQA
LELYYSFLLSMRGTGCRDVVVVGGNHDSPATLNAPARLLRHLRVHVVGCVPDCFEEQVLV
LDDAQGKPGLVVCAVPFLRDRDVRLSVPGETAEEREARIKQGIADHYARCAEVEQVWQLK
DLGLPVLATGHLYAAGAAPSDSERTIHVGNLGQITADHFPAVFDYVALGHLHRPQRVGGR
EHIRYSGSPIPLSFSEIDHPKEVLLLDFQGGKLTELQSLPVPGARRLVRFHGTLQEVTEG
LTAYDNTGYPLPAWADVQIHSELTQLEVADALLTVIQALDRQQLEVLARRHFRLVKLRAL
GQAEETDDTPLTRSLHDFTEREVFEQRLEAEPEASRAELLRTFDELLERM
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtactacacaccgccgactggcacctaggccagcggtttattcagggccacgag
cgaaccgacgagcaccgccactttctggagtggctagtgcaaaccgtgcgcgagcagcag
gtagaagtgctggtggtagccggtgacattttcgacactggctcgccctctaatcaggcc
ctggaactgtactactcctttttgctcagcatgcgcggcaccggctgccgcgacgtggta
gtggtaggaggcaaccacgactcgccggctaccctcaatgccccggcccgcttgctgcgc
cacctgcgcgtgcacgtggtgggctgcgtgcccgactgcttcgaggagcaagtattggtg
ctggatgatgcccagggcaaaccgggcctggtggtgtgcgccgtgccctttctgcgcgac
cgggacgtgcgcctgtcggtgcccggcgagacggccgaggaacgggaagcccgcatcaaa
cagggcattgccgaccactacgcccgttgcgccgaggtagagcaggtctggcaactcaaa
gacttaggcctgcccgtgctggcgaccggccacctctacgcggccggcgcggccccgtcg
gattcggaacgcacgattcacgtgggcaacctgggccagattacggccgaccacttcccg
gccgtgttcgattacgtggccctggggcatttgcaccgcccgcaacgggtaggcggccgg
gagcatatccgctattcgggctcgcccattccgctgtcgttttcggaaatcgaccacccc
aaggaagtactgctgctggattttcagggcggcaagctcacggaactgcaaagcctgccg
gtgcccggcgcccggcgactggtgcgtttccacggcaccctgcaggaagtaacggaaggg
ctcacagcctacgacaacaccggctaccccctccccgcctgggctgatgtgcagattcat
tcggagctaacccaactggaagtagccgatgccctactaaccgtgattcaggccctggac
cggcagcagctggaagtgctggcccgccgtcacttccgcctagtcaagctccgcgccctg
gggcaggccgaggaaaccgacgatacgcccctcacccgcagcctccacgatttcacggag
cgcgaagtatttgagcagcgcctagaagccgagcccgaggccagccgcgccgagctactc
cgcaccttcgacgagttgctggagcggatgtag
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