Hymenobacter sublimis: MWH26_05820
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Entry
MWH26_05820 CDS
T09379
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
hsb
Hymenobacter sublimis
Brite
KEGG Orthology (KO) [BR:
hsb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsb02000
]
MWH26_05820
Transporters [BR:
hsb02000
]
Other transporters
Pores ion channels [TC:
1
]
MWH26_05820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
TonB_dep_Rec_b-barrel
CarboxypepD_reg
EMC7_beta-sandw
PEGA
fn3_3
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
UPL50423
LinkDB
All DBs
Position
complement(1381206..1384223)
Genome browser
AA seq
1005 aa
AA seq
DB search
MKHPYLAKLALPLLCAGVSVSSAYAQGIGTVSGRVLDEKGEGMPGVTVLIEGTSLGGSTN
SDGSFSIQNVPSGPHTLVMSFVGYTTKRQPINVTAGQNTAVENLSLAENTTLLNEAVVIG
YGTQRKQDLTGAVEQVSERQFVKGQVTNPEQLVQGKVAGLQVTTGGGAPGAGSSIRIRGG
SSLTASNDPLIVIDGVPVDNRGLSGTSNPLSLINPNDIESISVLKDASSTAIYGSRASNG
VILITTKKGLQGEKLRVNVSSQNSVSKARNEVDVLNASELRAVVASIGNAQQKTLVGNAS
TNWQNEIFRTAQTTDNNVSISGSAGKVPFRVSGGYLDQEGLLLRNDLKRYTGSVGLNPVL
LDGSLRVNVNVKGSIVDNNFSNQGAVGAAVYANPTFPVYNGSIYGGYTEVLDPNNPSNLN
TLATRNPLGLINQRRDRSTVKRSIGNIQLDYKLPFLEGLSANLNLGYDIQRGRGTVFVPV
QAASDFNRVVTVNGATVGQGGVNNEYAQDKNNKLLEAYLSYGRQFGVGRLDLLAGHSYQS
FEDKNYVFADRIASGEVYTAAPTLLNGQNFRDPRYVLVSFFGRANYNINDKYLLTATMRA
DGSSRFLESNRWGYFPSAAAAWRIKGEDFLKNSTAISELKLRVGYGQTGQQDIGDIYPYL
ARYTPSEASAQYQFGDEFTNTLRAAAYDRNIKWETSTTYNAGLDYGFLDGRISGAIDVYH
RKTDDLLNNVFIPALANLSNKLTTNVGSLENNGIEGSVNVDVVRGEKLNWTLNANATAYR
VKITQLTNASDPSYLGDETGGISGGVGNNIQINSVGYQPNAFYVFQQVYGADGKPLEGVY
VDRNGDGVVNVNDRYRYQSPAPRVSLGFGSNLNYGKASLAFTLRSNIDNYVYNNVRSQAF
FPVGASNGVLGNFNRELLVSNFTTSQLQSDYYIENASFLRMENLTVGYNLGSIYNDKANV
NLSFAVQNLFVITDYKGLDPEIFGGIDNNIYPRPRTFTLGLNIGF
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacccctatctagcgaaactggcgctgcctctcctgtgcgcaggtgtaagcgtg
agcagcgcatatgcgcagggaatcgggacggtgagtggccgcgtactcgatgagaagggc
gaaggcatgcccggcgttacggtcctgattgagggtacctccctgggaggctccacgaac
tccgacggttccttctctatccagaacgttccctcgggcccccacaccctggtaatgtcg
ttcgtgggttacaccaccaagcggcagccgatcaatgtgactgcaggccaaaacactgcc
gttgaaaacctatcgttggctgaaaatactacccttctaaatgaggcagtagttattggt
tacggcactcagcgcaagcaagatctgacgggcgctgtagagcaggtatcggaacgccag
tttgtaaagggccaggtaacgaaccccgagcagttagtacaaggtaaagtagcgggcttg
caggtaaccaccggcggtggtgccccaggcgccggctccagcatccgcatccgcgggggc
tcgtcgctgaccgcttcaaacgatccgctgattgtaattgacggggtaccggtagacaac
cggggtctttctggtacgtccaaccctttgtcgctgatcaaccccaatgacattgagagc
atttcggtgctgaaagacgcttcctccacggccatctatggctcgcgggcctcgaacggc
gttattttgattacaaccaaaaaaggcctgcagggcgaaaagcttcgcgtaaacgttagc
tcacagaactccgtttcgaaagctcgcaatgaggtcgatgtgttgaatgcctccgaactg
cgcgctgtggtggcctcaattggcaacgctcagcaaaaaacgctggtaggcaacgccagc
accaactggcagaacgaaatcttccgcacagcccaaactactgataataacgtcagcatc
tcgggctcggcaggcaaagtgccgttccgtgtttctggaggctacctggatcaggaaggc
ctactattacgtaacgatttgaagcgctacacgggctccgttggcttgaacccggtgctg
ctcgatggcagcctgcgcgtgaatgtcaatgtgaaaggttctatagttgacaacaacttt
tcgaaccagggcgctgttggcgcagccgtgtatgctaaccccacgtttccggtttacaac
ggcagcatctacggtggctacacggaggtactggaccccaacaatcctagcaacctgaat
acgctggctacccgcaacccgctgggccttatcaaccagcgccgcgaccggagcaccgta
aagcgcagcattggtaacattcagctggactacaagcttcccttcctggaaggcctaagc
gctaacctgaatctaggctatgatattcagcgaggccgaggtacggtattcgtgccagta
caggccgcctctgactttaaccgggtagtaaccgtgaacggcgctacggttggtcagggt
ggcgtaaataatgagtacgcccaggacaagaataacaagctgttggaagcttacctgagc
tacggtcgtcagtttggtgtcggccgcctggatctgctggcaggccactcctaccagagc
ttcgaggataagaactacgtgtttgctgaccggattgctagcggcgaagtatacaccgca
gctcctaccctactcaacggccaaaactttcgcgacccacgctacgtgctggtatcgttc
ttcggccgggcgaattacaacatcaacgacaagtacctgttgacggctaccatgcgcgcc
gacggttcttcgcgcttcttggaaagcaaccgctggggctacttcccttcggccgccgcg
gcttggcgcattaaaggagaagatttcctgaaaaactctaccgccatttctgaactgaag
ctgcgcgtggggtacggccagaccggccagcaagacatcggggacatttacccttaccta
gcgcgctatacccccagcgaggcgtcggctcagtaccagtttggggatgagtttacgaac
acgttacgggctgcagcctatgatcgtaacatcaagtgggaaacttccactacctacaat
gccggtctggactacggcttcctggacggccgaatttcgggtgctattgatgtgtaccat
cgcaaaaccgatgacctgctgaacaacgtatttattccggctctagccaacctctctaat
aagctgacgaccaacgttggttcgctggagaacaatggtattgagggctcggtaaacgta
gatgttgttcggggcgaaaagctcaactggaccctgaacgccaatgctacggcgtaccgc
gtgaaaatcactcagctaactaacgcctctgacccctcctatctgggcgacgaaaccggt
ggtatttcgggtggtgtgggcaacaacattcaaatcaactcggtgggctaccagccaaat
gccttctacgttttccagcaggtatatggcgctgatggcaagccgttggaaggagtatac
gtggaccgcaacggagacggggttgtgaatgttaacgaccggtaccgttaccagtcgcca
gctccacgggtaagcttaggcttcggttccaacctgaactacggtaaggccagcttggcc
ttcacgctgcgctcaaacattgataactacgtttataacaacgttcgttcgcaggctttc
ttcccagttggtgcctccaatggggtattgggcaacttcaaccgcgagctgctggtatcg
aatttcactacctcccagctgcagtcggattattacattgagaatgcttcgttcctacgg
atggagaacctaacggtaggatacaacctgggcagtatttacaatgacaaagcgaacgtg
aacttgtcttttgctgttcagaacttgttcgtaatcaccgactacaaagggcttgatcct
gaaatatttggtggtatcgataacaacatttatccccgtccgcgcaccttcactctcggg
ctgaacatcggcttctaa
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