Hymenobacter sublimis: MWH26_09495
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Entry
MWH26_09495 CDS
T09379
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
hsb
Hymenobacter sublimis
Pathway
hsb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MWH26_09495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsb03019
]
MWH26_09495
Enzymes [BR:
hsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MWH26_09495
Messenger RNA biogenesis [BR:
hsb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MWH26_09495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
AAA_22
AAA_30
UvrD-helicase
Utp25_C
ERCC3_RAD25_C
EB1
Motif
Other DBs
NCBI-ProteinID:
UPL51124
LinkDB
All DBs
Position
2254348..2255760
Genome browser
AA seq
470 aa
AA seq
DB search
MSFDELNLIDPILGALREEGYTTPTPIQQQAIPQVLEGHDLLGIAQTGTGKTAAFTVPIL
QILHQTAQVERHAPGRIRCLVLTPTRELAIQIGESFAAYGRHLPKLRSTVIFGGVGQHPQ
VQALKRGVEVLIATPGRLLDLMNQGFIDLRNIEIFVLDEADRMLDMGFIHDIKRILPKLP
ARRQTLFFSATMPGQIQELANSILRPNPVKVTVTPVSSTADTVTQAVYMVEKNDKPALLE
HVLSDKNIRRVLVFTRTKHGADKVVRTLAKAEIPAEAIHGNKSQNHRQRALSNFKAGTTR
VLVATDIAARGIDVDELTHVINYEIPNEPETYVHRIGRTGRAGADGTALSFCDDEERAYL
QDIQKLIRRQVPVVQSHPYTSSQVAPVPLSGGPAIKRPKGPAGRPPRAPQAGGQNRSEGG
GRQQNRGGEQRPRGGNHATGPRPEGTANAGGAGRSGSGQRRFRGNGGGSR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgacgaactaaacctgattgaccccatcctgggcgctttgcgcgaggaaggg
tacactacccctacccctattcagcagcaggctattccgcaggtgctggaaggtcacgat
ctgctgggcattgcccaaaccggtaccggcaaaacggccgccttcaccgttcccattctc
cagattctgcaccaaacggcccaggtggagcgccacgcgcccggccggattcgttgcttg
gtgctgacccctacccgggagctggctattcagattggggaaagctttgccgcgtatggc
cgccacctgcctaaattacgctctacggttatttttgggggcgtaggccagcacccgcag
gttcaggccctgaagcggggcgtggaggtactcattgctacccccggtcgcctgctcgac
ctgatgaaccagggcttcatcgacctgcgcaacattgaaatattcgtgcttgatgaggcg
gaccgcatgctcgacatgggcttcatccatgacatcaagcgcatcctgcccaagctgccg
gcccgccgccaaaccctgtttttctcggcaaccatgcctggccaaattcaggagctggcc
aacagcatcctgcggcctaacccagtgaaagtgaccgtaacgcccgtttccagcacggcc
gatacagtaactcaggctgtgtacatggtcgagaagaacgacaagcccgccctgctcgag
catgtgctatccgacaagaacattcggcgcgtgctggtgtttacccgcaccaagcatggg
gccgacaaggtagtgcgcacgctagccaaagccgaaattccggccgaagccattcacggt
aacaagtcgcagaaccaccgccagcgggccttgagcaactttaaggccggtactacccgc
gtgctggttgccaccgacattgcggcccggggcattgatgtggacgagctgacccacgtt
atcaactacgaaattccgaacgagcccgaaacctacgtgcaccgcattggccgcaccggc
cgcgccggcgccgacggcaccgccctgtcgttctgcgacgatgaggagcgcgcgtacctg
caggatattcagaagctgattcgtcggcaggtgcccgtagttcagtcgcacccttatact
tccagccaagtggcaccggttccgctttccggcggtccggccatcaagcggcctaaaggc
ccggccgggcgccccccccgcgccccccaggcgggcggccagaaccgctccgaaggaggt
ggccggcagcagaaccgcggcggcgagcagcgcccacgtggtgggaaccacgcaacgggc
ccgcgccctgagggcaccgccaatgctggcggtgccggccggagcggtagcggtcagcgc
cgcttccggggcaatggcggcggtagccgctaa
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