Hymenobacter sublimis: MWH26_09615
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Entry
MWH26_09615 CDS
T09379
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hsb
Hymenobacter sublimis
Pathway
hsb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MWH26_09615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsb03019
]
MWH26_09615
03009 Ribosome biogenesis [BR:
hsb03009
]
MWH26_09615
Enzymes [BR:
hsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MWH26_09615
Messenger RNA biogenesis [BR:
hsb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MWH26_09615
Ribosome biogenesis [BR:
hsb03009
]
Prokaryotic type
rRNA helicases
MWH26_09615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
DUF7400
Motif
Other DBs
NCBI-ProteinID:
UPL51146
UniProt:
A0ABY4JHB4
LinkDB
All DBs
Position
complement(2281493..2283451)
Genome browser
AA seq
652 aa
AA seq
DB search
MENEKEKMKFSELTLSEEMQRAITEVGYEEASPIQAGAIPVLLAGRDVIGQAQTGTGKTA
AFSIPAIELIDTDSREVQALVLCPTRELAVQVSGEIQKLGKYKRGLAVVPIYGGSSYDRQ
FRALERGVQIVIGTPGRVMDHIERGTLKLDNCKMIILDEADEMLDMGFRDDIETVLKKMP
EQRQTVFFSATMSKPIMEMTKRYQTEPQIVKVNHQEMTVTNIEQSYFEVRGPQKKDVLTR
LIDMYNIKSGIVFANTKRMVDEIVGDLQAKGYFAEGLHGDMGQQQRQNTLDKFRKGTLEI
LVATDVAARGIDVDNVEVVVNYDLPADEEYYVHRIGRTGRAGKQGKAFTFVSGRDIYKLR
DIMRFTKATIKQERVPSFEDVSEVKTTLMLNSIKEVIDKGNLDKYIARVQRLIDQDQEDG
VTSLGVAAALLKMTMKEDKRAQESLDASRTQGAARPGFTRLFVTMGKKDRLHPRDIVDLI
AENTSLTAGKVGDIALYDKFSFVEVPNEFVEEVVTQLGRSTIQGRPVAFNIATPRQEGDA
QQEGGNRGGFGGERPRRGPGGFGGGERREGGFGGNRGGGSYGGNRGGGSYGGGERREGGF
GGNRSGGSYGGNRGGGSYGGDRREGGSYGGNRGGGSYGGGYKGKRDNGGFDE
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgaaaaggaaaaaatgaaattcagtgagctgaccctctctgaagaaatgcag
cgtgccattaccgaggtagggtacgaggaagcttcgccgattcaggcgggcgctattccc
gtgctgctcgctggccgcgacgtaattgggcaggcccagaccggtaccggtaaaaccgcc
gccttctccatccccgccattgagctgattgacacggactcccgcgaagtgcaggccctg
gtgctgtgccctacccgcgagctggccgtgcaggtttccggcgaaatccagaagctgggc
aagtataagcggggtctggccgtagtaccaatttacggtggctccagctacgaccggcag
ttccgcgccctggagcgcggcgtgcagatcgtcattggtacgcccggccgcgtcatggac
cacattgagcgcggtaccctgaaattggacaactgcaagatgatcatcctcgatgaggcc
gacgaaatgctcgacatgggcttccgcgacgacatcgagacggtgctcaagaagatgccc
gagcagcgccagacggtgtttttctcggctaccatgagcaagcccatcatggagatgacc
aagcgctaccaaacggagccgcagatcgtgaaggtaaaccatcaggaaatgacggttacc
aacattgagcagagctactttgaagtgcgcggccctcagaaaaaggacgtactgacccgt
ctgatcgacatgtacaacatcaagtcgggcatcgtcttcgcgaacacgaagcgcatggtt
gacgagattgtgggcgacttgcaagctaaaggctactttgccgaaggtttgcacggcgac
atgggccagcagcagcgccagaacaccctggacaaattccgcaaaggcaccctggaaatc
ctcgtggccaccgacgtagccgcccgcggcatcgacgtggacaacgtggaggtagtggta
aactacgacctgcccgccgacgaggaatactacgtgcaccgcatcggccgcacaggccgc
gctggtaagcaaggcaaggctttcaccttcgtgagcggccgcgacatctacaagctgcgc
gacatcatgcgcttcaccaaggccaccatcaagcaggagcgtgtgccttcgtttgaagat
gtatcggaggtgaaaactaccctgatgctcaactccattaaggaggtcattgacaagggt
aacctggataagtacattgcccgcgtgcagcgcctgatcgaccaggatcaggaggatggc
gtaacgtctttgggcgtggccgcggccctgctgaaaatgacgatgaaagaggacaagcgc
gctcaggaaagcctcgacgctagccgcacccagggtgcagcccgccccggcttcacgcgc
ctgttcgtcacgatgggcaaaaaggaccgcctgcacccccgcgacatcgtagacctgatt
gctgaaaatactagcctcacggccggtaaggtaggcgacattgcgctgtacgataagttc
agcttcgtggaagtaccgaatgagttcgtggaagaagttgtaacccagttgggtcgcagc
accattcagggccggccggtagccttcaacattgctaccccccgtcaggaaggtgatgcc
cagcaagagggcggcaaccgcggcggcttcggcggcgagcgtcctcgtcggggcccgggt
ggcttcggcggcggtgagcgtcgggagggcggcttcggtggtaaccggggcggcggcagc
tatggcggcaaccgcggcggcggctcctacgggggcggcgagcgtcgggaaggcggtttc
ggcggcaaccggagcggtggttcctacgggggcaaccggggcggcggctcttacggcggc
gaccgtcgggagggtggctcttacggtggcaaccggggtggcggcagctacggcggcggc
tacaagggcaagcgcgacaacggcggcttcgacgaatag
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