Hymenobacter sublimis: MWH26_12725
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Entry
MWH26_12725 CDS
T09379
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
hsb
Hymenobacter sublimis
Pathway
hsb00541
Biosynthesis of various nucleotide sugars
hsb01100
Metabolic pathways
hsb01250
Biosynthesis of nucleotide sugars
Module
hsb_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hsb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MWH26_12725 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hsb01005
]
MWH26_12725 (kdsA)
Enzymes [BR:
hsb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
MWH26_12725 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
hsb01005
]
Lipid A
MWH26_12725 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
UPL48052
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All DBs
Position
complement(3055682..3056506)
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AA seq
274 aa
AA seq
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MIQALANVLPHFRHTDSGQFFLMAGPCVIEGEDMALRIAEQVRTLTDKLQIPYIFKGSYR
KANRSRLDSYTGIGDEKALRILQKVGREIGVPTVTDIHESEEAALAAEYVDVLQIPAFLC
RQTDLLVAAAKTGKVVNVKKGQFLSGESMQFAVDKVRQSGNENVILTDRGNSFGYSDLVV
DFRNLPAMREFGVPVVMDVTHSLQQPNQSSGVTGGKPQLIETIAKAAIAVGADGLFIETH
PTPATAKSDGANMLALDRLEDLLVKLTRVRQAIR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgattcaagctcttgccaacgttctgccccattttcgccacaccgattccggtcagttt
ttcctgatggcgggcccctgcgtgattgagggtgaggacatggccctacgtattgccgag
caagtccgcacccttaccgataagctgcagattccctacatcttcaagggctcttaccgc
aaagccaaccgctcccgcctcgattcttacacgggcatcggcgacgaaaaagccttgcgc
attctgcagaaagtagggcgggaaatcggggtgcctaccgtgacggacattcacgagtcg
gaggaagccgcgctggccgccgagtacgtggatgtgctccaaattccggctttcctgtgc
cggcaaacggatttgctggtagccgccgccaaaaccggaaaagtcgtgaacgtgaagaaa
gggcagttcttgagcggcgaatccatgcagtttgccgtggacaaggtgcgccagtcgggc
aacgaaaacgtgattctgaccgaccggggcaactctttcggctactccgacctggtagtg
gacttccgcaacctgcccgctatgcgcgagtttggcgtgcccgtggtgatggacgtgacc
cattccctgcagcagcccaaccagagcagcggcgtgacgggcggcaagccccaactcatt
gaaaccattgccaaagctgccattgccgtaggcgccgacggcctgtttatcgagacccac
cccacgccggccaccgccaaatcggacggggccaacatgctggccctggaccggctcgaa
gatttgctcgtgaagctcacgcgcgtgcgccaggccatccggtag
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