Hymenobacter sublimis: MWH26_13070
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Entry
MWH26_13070 CDS
T09379
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hsb
Hymenobacter sublimis
Brite
KEGG Orthology (KO) [BR:
hsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsb03016
]
MWH26_13070
Enzymes [BR:
hsb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MWH26_13070
Transfer RNA biogenesis [BR:
hsb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MWH26_13070
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
UPL48115
LinkDB
All DBs
Position
3146781..3147956
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AA seq
391 aa
AA seq
DB search
MPDIQYITEGPDVAQAAQALHQRARVAVDLEFDDMRHRYGRNLALIQIYDGETVFLIDPL
PLTNPAQELEPLWAVLRDPAVEKVFHSCKSDILLLDELYGVHVRTITDTSVQYTLLAEAD
NNISLGRLIQQELGLEVDKGEQKSNWLKRPLTEAQKHYAANDVLYLFELADRLADKLAAL
GRTSWSEQENRALEEVRYARDERPYLRLAGKYRIQPQELPLFRDLFLLRDEVARSIDRPT
YMVASNDRLAELTRLPVTSSGHLRNAPGLHPELKRSPYAERLISLTQEDREPEPPLPAEQ
RRFPFRRRLTGAKAAQADAREALLMALKTHLAEDHSPVMANLVLSNRLIADIIEQGADAT
LRPWQHELLQHTAIQHGINFQDVALPFDLKA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatatacagtatatcacggaaggacctgatgtagcacaagccgcccaggccctt
caccagcgcgcccgcgtggccgtcgatttggaatttgatgacatgcgccaccgctacggc
cgcaatttggccctgattcagatttatgacggtgaaactgtttttttgatcgaccccctt
cctcttactaatcctgctcaggagctagagccgctgtgggccgtactccgggaccccgcc
gtagagaaagtcttccatagctgcaaatccgatatcctgcttctggacgagctgtacggc
gtgcatgtgcgcaccattacggatacaagtgttcaatatacgcttttagcagaagccgac
aataatatttccttggggcgcctgattcaacaggaactagggctggaagtagataagggc
gagcagaagtcgaattggctgaagcgcccgctcacggaggcccaaaagcactacgccgcc
aacgacgtcctttatctgtttgagctggctgaccgcttggccgacaagctggctgctttg
ggccgcacgagctggtcggagcaggaaaaccgggcgctagaagaagtgcgctacgcccgt
gatgaacggccctacctgcgtctggctggcaaataccgcattcagccccaggagctgccg
ttgtttcgggatttgtttctgctgcgcgacgaggtagcgcgctccatcgaccggcccacc
tatatggtagccagtaatgaccgcctggccgaacttacgcgcctaccggttaccagctcc
ggccatttgcgcaacgctcccgggctgcacccggagctaaagcgcagcccgtatgcggag
cgcctgatttccttgacccaggaagaccgggagccggagcctcccctgcccgccgaacag
cggcgctttccctttcggcggcggctcacgggagccaaagcggcccaggccgatgcccgc
gaagcgctgctgatggcgctgaaaacgcatttggcagaagaccacagccccgttatggcc
aacttggtactgagtaaccgcctgattgccgacattattgagcagggcgctgatgctacc
ttgcggccctggcagcatgagctattgcagcatactgctatccagcacggcatcaatttc
caggacgtagcgctacccttcgacctgaaggcttag
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