Hymenobacter sublimis: MWH26_13775
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Entry
MWH26_13775 CDS
T09379
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hsb
Hymenobacter sublimis
Pathway
hsb03030
DNA replication
hsb03430
Mismatch repair
hsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MWH26_13775 (dnaE)
03430 Mismatch repair
MWH26_13775 (dnaE)
03440 Homologous recombination
MWH26_13775 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsb03032
]
MWH26_13775 (dnaE)
03400 DNA repair and recombination proteins [BR:
hsb03400
]
MWH26_13775 (dnaE)
Enzymes [BR:
hsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MWH26_13775 (dnaE)
DNA replication proteins [BR:
hsb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MWH26_13775 (dnaE)
DNA repair and recombination proteins [BR:
hsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MWH26_13775 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF6282
T2SSK
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UPL48253
LinkDB
All DBs
Position
3308413..3312129
Genome browser
AA seq
1238 aa
AA seq
DB search
MPVFSHLHCHTQYSLLDGQASISALMKKAQADGMPAVALTDHGNMFGAFNFVAEANKYNV
KPIVGCEFYLVEDRHKKSFSREKGERDVRHHQLLLAKDQAGYQNLAKLCSMSFIEGVYSK
YPRIDKELLLQYSEGLIATSCCIGAEIPQALLWKTEAEAEKLLQWWLDVFGQDYYIEIQR
HGIENIDNTGKSQEDLNQVLLKWAQKYNVKVICTNDSHYVDQTDFAPHDLLLCVNTGEEH
SIPVGDFQTKYFRLVSGENKVLYDHLDNLRPLASSDDQVRRQLMRIDEEAQMPKPRSRFG
FPNDQFYFKSQDEMNHLFRDVPESVDNTNEIVDKITPPKLQRDILLPNFPIPAPFANADE
FLRELTYVGAFGPSAGKGVVTMTKPPRYSERTPEIEERLDYELRIIETMGFAGYFLITQD
FINHGRSVGVAVGPGRGSAAGSAVAYCVGITNIDPIKYSLLFERFLNPERVSMPDIDIDF
DDVNRQRVIDYVVGKYGKTQVAQIITFGTMAAKSSIKDVARAMELPLPQTNELAKMVPEQ
VGTTLQKAFAENQELDMIRRDDAPDNLRGQILRLAEKLEGSVRNTGIHAAGVIIAPDDIT
KYIPVSTSKDSDLLVTQFDGKVIESAGMLKMDFLGLKTLTIIVDALALIKKNHGVDINID
DIPLDDPKTYELYQRGDTIGTFQFESEGMRMYLKDLKPTNIEDLIAMNALYRPGPMQFIP
NFINRKHGREEIEYPHELLEPILNYSQGIMVYQEQIMQAAQILAGYSLGGADLLRRAMGK
KDMKKMAQEREKFCEGAKKLHGIVAKKANEVFDVMEKFAAYGFNRSHSAAYSVVAYQTGY
LKANYPAEYMAAVLTNNMSDIKKVTFFIEEARRQGVAVLGPDVNESILKFNVNEKGQIRF
GMAAVKGAGEAAIENIVQERDKKGPYTDIFDFSKRVNLRAVNKKTFESLALSGAFDSFER
YHRRQFVEAPSGDQNLIEKAVRMGQQYQADQDSAQQSLFGGGAFGAVAMPLPKVADMEPW
AATELLRREKEVVGFYLSGHPLDDFKLEIDSYCTCGLDKVENYKNREVTVAGLISNVLFK
TTKTGQPFVSFSVEDYESSLNLALFRDDYSRFSALINPRNYDKEQVPPMYIRGKYAQRFR
DSDQFEFKILTMEPLFNVAEKLANGVRVQLDLRTITEPFMDRFMEAVEGCAGSKKLEIKF
AEPHEHLTVDTYSRRYRIEPKEFIRKMREMEIDACQLI
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtattctcgcacctccactgccacacccaatactccctgctcgatggtcaggcc
agcatttcggccctgatgaaaaaggcccaagccgatggcatgcccgccgtagcccttacc
gaccacggcaacatgtttggggccttcaactttgtagcggaagccaataagtacaacgtg
aagcccattgtgggctgcgagttttacctggtagaggaccggcacaagaaaagcttcagc
cgcgaaaaaggcgagcgggacgtgcgccaccaccagctgctgctagccaaggaccaggcc
ggctaccagaacctggccaagctctgctccatgagctttattgagggcgtgtacagcaag
tacccccgcatcgataaggaactgctgctgcagtacagcgaagggcttattgctacttcc
tgctgcatcggcgccgaaattccgcaagccctgctctggaaaaccgaggcagaagccgag
aagctgctgcaatggtggttggatgtgttcgggcaggattactacatcgaaattcagcgc
cacggcatcgagaacatcgacaacacgggcaaaagccaggaagacctgaaccaggtgctg
ctaaagtgggcccagaagtacaacgttaaggttatctgcaccaacgactcccactacgtt
gaccagaccgactttgcgcctcacgatctgctgttgtgcgtaaacacgggcgaggagcac
agcatcccggtgggtgacttccaaaccaagtatttccggctggtttcgggggaaaacaaa
gtgctctatgaccacctcgacaacctgcgccccctggcttcctccgacgaccaggtgcgc
cgccagctcatgcgcattgatgaggaagcccaaatgcccaagccccgctcccgcttcggt
ttccccaacgaccagttctatttcaagagccaggacgagatgaaccacctgttccgggac
gtgccggaaagcgtggacaacaccaacgaaattgtagacaaaatcacgccgcccaagctg
cagcgcgacattttgctccctaattttcccattcccgcgcccttcgccaacgccgatgaa
ttcctgcgcgagctgacctacgtgggggctttcgggccgagtgcaggcaaaggcgtggtg
accatgaccaagccgccccgctattccgagcgcacgccggaaatcgaggaacgcctggat
tatgagctgcgcatcattgaaaccatggggtttgcgggctactttcttatcacccaagac
tttatcaaccacggccgcagtgtgggcgtggccgtagggccaggccggggctcagcggcg
ggctcggcggtggcctactgcgtgggcatcaccaacatcgacccgattaagtattcccta
ctgttcgagcgtttcctgaatccggagcgcgtatcgatgcctgatattgacatcgatttc
gacgacgtgaaccgtcagcgcgtcatcgactacgtggtgggtaagtacggcaaaacccag
gtggcccagattatcaccttcggtaccatggccgccaagtccagcatcaaggacgtggcc
cgggccatggagctacccctgccccagaccaacgaactggccaagatggtacccgagcag
gtaggcaccaccctgcaaaaagcctttgccgaaaaccaggagctggacatgattcggcgc
gacgacgcccccgacaacctgcgcgggcaaattctgcgtctggctgagaagctggaaggc
tcggtgcgcaacacgggcatccacgccgccggcgtcatcatcgcccccgacgacatcacc
aagtacattccggtgtccacgtccaaggactcggatttactcgttacccagttcgacggt
aaggtgattgagagtgccgggatgctgaaaatggacttcctggggctcaagacgctcacg
attatcgtggacgccctggccctgatcaagaagaaccacggcgtcgacatcaacatcgac
gacatcccgctcgacgaccccaaaacctacgagctgtaccagcgcggcgacacgattggc
acgttccagtttgaatccgagggcatgcgcatgtacctcaaggacctcaagcccaccaac
atcgaggacctgattgccatgaacgccctgtaccggccaggccccatgcagttcatcccg
aacttcatcaaccgcaagcacggccgcgaggaaattgaatacccccacgagctgctggag
cccatcctgaactactcccagggcattatggtgtaccaggagcagatcatgcaggccgcc
cagattctggccggttactccctgggcggcgccgatttgctacgccgggccatgggtaag
aaagacatgaaaaagatggcgcaggagcgggagaaattctgcgagggcgccaagaagctg
cacggcatcgtggccaaaaaggccaatgaggtgttcgacgtgatggagaagtttgcggct
tacggcttcaaccgctcccactccgccgcctactcggtggttgcctaccagacgggttat
ctaaaagcgaactaccccgccgagtacatggccgctgtgctgaccaacaacatgtcggac
attaagaaggtgactttctttattgaggaagcccgccgccagggcgtggccgtactcggg
cccgacgtgaacgaatccatcctcaagttcaacgtaaacgaaaagggccagatccgcttt
ggcatggccgccgtgaagggcgcgggcgaggccgccattgaaaacattgtgcaggagcgc
gacaaaaaaggcccctacactgatattttcgacttctcgaagcgcgtgaacctgcgggcc
gtgaacaagaaaacatttgaaagcctggctctctcgggcgctttcgactcgtttgagcgc
taccaccgccgtcagtttgtggaggcccccagcggcgaccagaacctaattgagaaagcc
gtgcgtatgggccagcaataccaggccgaccaggattcggcccagcagagtctgtttggg
ggcggggcctttggggccgtagccatgcccctacccaaagtggccgacatggagccttgg
gccgctacggagctgctgcgccgcgaaaaagaggtagtaggcttttacctctccggccac
ccactggatgacttcaagctggaaattgactcctactgcacctgcgggctggacaaggta
gagaactacaaaaaccgcgaggtgacggtagcaggcctgatttccaatgtgctgtttaaa
accaccaagaccggtcagcccttcgtttccttcagcgtggaagactacgagtcgagtctg
aacctagctttgttccgcgacgactactcccgcttctcggccctgataaacccgcgcaac
tacgacaaagaacaggtaccgcccatgtacatccggggcaagtacgcccagcgcttccgc
gactccgaccagtttgagtttaagattctgaccatggagcccctgttcaacgtggctgag
aagctcgccaacggcgtgcgcgtgcaactggacctgcgtaccatcacggagcccttcatg
gaccggttcatggaagccgtggaaggctgcgccggctcgaagaagctcgaaatcaagttc
gccgagccccatgagcacctgacggtagacacctactcccgccgctaccgcattgagccc
aaggaattcatccgcaaaatgcgcgaaatggaaatcgacgcctgccaattgatttaa
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