Hymenobacter sublimis: MWH26_18210
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Entry
MWH26_18210 CDS
T09379
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hsb
Hymenobacter sublimis
Pathway
hsb03410
Base excision repair
hsb03430
Mismatch repair
hsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MWH26_18210 (recJ)
03430 Mismatch repair
MWH26_18210 (recJ)
03440 Homologous recombination
MWH26_18210 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsb03400
]
MWH26_18210 (recJ)
DNA repair and recombination proteins [BR:
hsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MWH26_18210 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MWH26_18210 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MWH26_18210 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UPL49109
UniProt:
A0ABY4JCL8
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All DBs
Position
4349892..4351613
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AA seq
573 aa
AA seq
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MEKRWIRKPAPDAEKVRHLADALRVNEAIISLLCQRHVCSFEEARAYFRPSLDSLPDPLL
MRDMDRAVERLVQALHLGQRVLVFGDYDVDGTTSVALVYSYLRQYFGPERVDYYIPDRYK
EGYGVSEAGIDFAANFGYELIIALDCGVKAVDKIAYANQRGIDFIICDHHLPGTELPAAV
AVLDPKRADCAYPFKELSGCGVGFKLMQAFTQHQGWPEDDLYELLDLVAVSIAADIVPIY
GENRTLAYHGLRLINDRQRPQRPGLGALRELAGLQTTELNISSLVFGFAPRINAAGRMGD
AKRSVAMLLAQSTDEAKEKAGVVDKTNQERRGFDTSITKEALEMIEQDALLRTASSTVLF
KQDWHKGVVGIVASRCLDKYYRPTIILTESNGKATGSARSVVGFDVHQAIEECAELLDQF
GGHMYAAGLTLPVENVPAFREKFERIVAGRILPEQLIPPVEIDHVLQLTDITPSFFRLLS
QMEPFGPGNPNPVFASEKVYATPDSARIVGNSHLKLTLTQDGRHAVDAIGFGLGEYHEQI
RQGQPFSVCYTVEMNEFRGAKNLQLRIKDIRWE
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgatggattcgcaagcccgcgcccgacgctgaaaaagtccggcatttggcc
gacgccctgcgcgtcaacgaggctatcatttctctgctgtgccagcgccacgtctgcagc
ttcgaggaggcccgcgcgtactttcgccccagtctggattccttgcccgaccccttgctc
atgcgggacatggaccgcgccgtggagcgcctggtgcaggccctgcacttgggccagcgg
gtactggtgtttggcgactatgacgtggatgggacgacctccgtggccctagtgtacagc
tacctgcggcaatacttcgggcctgagcgggtggactactacattccagaccgctataag
gaaggctacggggtgtcggaggcgggcatcgattttgcggctaattttggctacgagctg
attattgccctcgactgcggggtgaaggccgtggacaaaatcgcctacgccaaccagcgt
ggtattgactttatcatctgtgaccaccacttgcccggtactgaactaccggcggccgtg
gccgtgctggaccccaagcgcgccgactgcgcctaccccttcaaagaactgtcggggtgt
ggggtaggctttaagctgatgcaagcctttacccagcaccagggctggcctgaggatgac
ctgtacgagctgctggacctagtagccgttagtattgccgctgatatcgtgcccatttac
ggtgaaaaccgcacgctagcgtatcacggtctgcgcctcatcaacgaccggcagcgccct
cagcgcccgggcctgggcgcgctacgggaactggcaggactacagacaaccgagcttaac
atcagcagcctggtatttggctttgcgccgcgcatcaatgccgccggccgcatgggtgat
gccaagcgctccgtggccatgctcctagcccagagcaccgacgaagccaaggaaaaagcc
ggagtcgttgacaagaccaaccaggagcgccgcggcttcgacaccagtattacgaaggag
gctctggaaatgattgagcaggatgcgttgctgcgcacggccagctccaccgtcctcttc
aagcaagattggcacaagggcgtagtaggcattgtggcctcgcgctgcctcgataagtac
taccggcccactattattctcaccgaaagcaacggcaaggctaccggctcagcccgctcc
gtggtggggtttgacgtacaccaagccattgaggaatgcgccgagctgctggaccagttt
ggggggcacatgtacgccgccggcctcacgctgcccgtagagaatgtgcccgccttccgc
gaaaagtttgagcgcattgtggccggccgcattctaccggagcaactgattccgcccgtg
gaaattgaccatgtgctgcagctcacggacatcacgccatcctttttccgactgctaagc
cagatggagcctttcggccccggcaaccccaacccggtatttgcctccgaaaaggtgtac
gctacccccgattcggcacgtattgtgggtaactcccacctgaagctcacccttacccaa
gatggccgccacgctgtagacgccattggattcggcctcggcgagtaccacgaacaaatc
cggcagggccagccatttagcgtctgctacaccgtggaaatgaacgagttccggggcgcg
aaaaacctgcagctgcggataaaggatattcgctgggagtag
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