Acetivibrio saccincola: HVS_01390
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Entry
HVS_01390 CDS
T05223
Symbol
recD1
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hsc
Acetivibrio saccincola
Pathway
hsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HVS_01390 (recD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsc03400
]
HVS_01390 (recD1)
Enzymes [BR:
hsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HVS_01390 (recD1)
DNA repair and recombination proteins [BR:
hsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HVS_01390 (recD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
PIF1
HHH_5
UvrD-helicase
nSTAND3
AAA_22
NTPase_1
Helicase_RecD
NPHP3_N
bpMoxR
ATPase_2
HHH_2
RsgA_GTPase
T2SSE
PhoH
AAA_16
DEAD
SLFN-g3_helicase
AAA
MeaB
AAA_29
MobB
AAA_28
AAA_5
ABC_tran
HHH
Thymidylate_kin
cobW
Rad17
AAA_14
TsaE
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AUG56244
UniProt:
A0A2K9E8E9
LinkDB
All DBs
Position
271604..273814
Genome browser
AA seq
736 aa
AA seq
DB search
MLVTYEGVVEEIIFTNEVNGFTVCEIQNDEETIIAVGFMPFINVGETLKVTGKMVNHPDY
GEQLKVEMYEKTLPKTIEAIEKYLGSGLIKGVGPATARKIVKRFGEDTLNIIQFHPEELA
TIKGIKLEKALKIGEIFAEQKELKDVVMFLQEYGISPSFSAKIYKHFGSGTIEKIRSNPY
ILAEEIHGITFKTADRIAKTIGIAPDSEHRIASGIKYVLSQAAAAGHTFVRSDNLTEYTS
NLLDVDISNIDNVLISLVMDKSVYVEKCEDHNRVYLSAFYNAELGVARRLFNLSMAEFKF
DLKDFDKKIEAIQEKEGIILADKQKEAVREALTNGVLVITGGPGTGKTTIIKTIISLLDG
EGYEVALAAPTGRAAKRMTEATGYEAKTIHRLLEIGYVGDGDQLVFMKTEGNPIEADVVI
IDEMSMVDILLMNNLLKAIAYGTRLILVGDVDQLPPVGAGNVLSDIIKSGIIKTVKLTEV
FRQARESMIVVNAHCINRGEDVVLNEKDKDFFLVSRNTPMEIAKTILELCGTRIPNCYGF
DPMKDIQVLTPMRKGIVGVSNLNKELQEILNPQDKNKREKVFRDFSFREGDKVMQIKNNY
NLKWEKKDNSLENGTGVFNGDTGIICEIDNEEQRVVVCFEDEKIVSYDFTIIDELELAYA
VTVHKSQGSEFPVIIMPVFSGPPVLLTRNLLYTAVTRARNLVILVGSKKCLEDMIQNDRE
TNRNSDLVGKLISLVV
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgttggttacttatgagggtgtggttgaagaaataatattcacaaacgaagtaaacgga
tttactgtatgcgaaatacaaaacgatgaggaaaccataatagctgtaggtttcatgcca
tttataaacgtgggagaaacgctgaaagttaccggcaaaatggtgaatcacccggattat
ggcgaacagcttaaggttgagatgtatgaaaaaaccctcccaaagacaattgaagccatt
gaaaagtatttaggctcaggacttataaaaggcgtgggacctgccaccgccagaaaaatt
gtaaaaagattcggggaggatactttaaatataatccaattccatccagaagagttggca
actataaagggtataaagctggaaaaggctttgaaaataggagagatatttgcagagcag
aaggaacttaaagatgtggtaatgtttttgcaggaatatggaataagcccaagcttttct
gctaaaatatacaagcactttggaagcggtacaattgaaaaaatcagatcaaatccatat
atacttgcagaagaaatacatggaataacatttaaaactgcagacaggattgcaaaaacc
ataggaattgcgcctgattcagaacacagaattgcaagcggtataaagtatgtgctgtcc
caggcagcagcggcaggacatacttttgtgagaagtgataacttgacagaatacacttcc
aatcttttggatgttgatatttccaacattgacaatgtccttatatcccttgtaatggac
aagtctgtttatgtggaaaaatgtgaagaccacaacagagtgtatttaagtgcattttat
aatgcagagcttggtgttgccagaaggctttttaacctgtccatggcagagtttaaattt
gatttaaaggattttgataaaaaaattgaagctatccaggaaaaagaagggataatactt
gccgataaacaaaaagaggcggtaagggaagccttaacaaacggtgtgctggtaattacc
ggaggtcccggaacgggtaaaaccaccattataaagacaataataagcctgttagatggt
gaagggtatgaggttgcattggcagccccaacaggccgggctgcaaagagaatgacggaa
gccacaggatatgaggcaaaaaccatacacagacttttagaaatagggtatgttggggac
ggggatcagcttgtgtttatgaagactgaaggaaaccccattgaggcggatgtggttata
atagatgagatgtctatggtggatatacttcttatgaacaatttgcttaaagccatagcg
tatggtacaaggctgatacttgtaggagatgtggatcagctccccccggtgggtgcagga
aatgtcttaagtgacattataaaaagcggtattattaagacggtaaaactgacagaagta
ttcaggcaagcccgggagagtatgatagttgttaacgcccactgtataaacagaggggaa
gatgttgttctaaacgaaaaggacaaggatttctttttggtgtcaagaaatacccctatg
gaaattgcaaaaaccatattggaactttgcggcacaagaatacctaattgttacggtttt
gacccgatgaaggatattcaggttttgacacctatgagaaagggaatagttggagtttca
aatttaaacaaagaacttcaggaaatattaaatccccaggataaaaacaaaagggaaaag
gtcttcagggatttttccttccgtgaaggggacaaggtaatgcagataaaaaataactat
aatttaaaatgggaaaagaaagacaactcccttgaaaatggtacaggagtttttaacgga
gatacaggcataatatgtgaaatagacaatgaagagcaaagagtggttgtgtgttttgaa
gatgaaaaaatagtcagctacgactttacaattatagatgaattagagctggcatatgcc
gtcacggttcacaaaagccagggaagtgaatttccggtaataataatgcctgttttttca
ggtcccccggtacttttgacaagaaatttactgtatacagctgttacaagagccaggaat
ttagttattctggtaggttctaaaaaatgccttgaagatatgattcaaaatgacagggag
accaatagaaattcagatttggtgggaaaattaatttcgctggtggtataa
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