KEGG   Acetivibrio saccincola: HVS_03070
Entry
HVS_03070         CDS       T05223                                 
Name
(GenBank) Helix-turn-helix domain protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
hsc  Acetivibrio saccincola
Brite
KEGG Orthology (KO) [BR:hsc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsc03000]
    HVS_03070
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hsc02048]
    HVS_03070
Transcription factors [BR:hsc03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    HVS_03070
Prokaryotic defense system [BR:hsc02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    HVS_03070
SSDB
Motif
Pfam: HTH_3 HTH_26 HTH_31 HTH_19 HTH_37 Peptidase_M78 DUF4344
Other DBs
NCBI-ProteinID: AUG56564
UniProt: A0A2K9E981
LinkDB
Position
672011..673132
AA seq 373 aa
MAEKLIGLSPDLIIHPGETLKEMLEDKEMSQRELAIRTSVTEPYISNIVKGKKPISVSFA
KKLEYALGVDASFWINLQSNYEKELADYEELNEISSEEINILQKIKKLTDYAKEIGLIAS
DIEGSLLVIEWRKLLNISKLTHISEISQLGAYRLSSSDNIEADILFTWLRIIDLITKSQQ
LDVELNIELLKEKLHLIRALTFEDIETIHIKLKEYLAECGIKFAIVKHFTGAPVQGVIKK
DSDGTLSLIMTLRRKFADVFWFTFFHEIGHIINGDIKDRLIDYEGVENETEIKADKFAAD
FLIDPIIYKKLVKSGDFSLSTIKELCEKMKIPSFILIGRLQREKHIEYHCFSDEKVRYEL
DEIERRQVQSNCC
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggcggaaaaattaattggtttatctcctgatcttattatacatccgggagaaacttta
aaagaaatgttggaagataaagaaatgagtcaacgagagttagctatacgaacaagcgta
acagaaccctatatcagtaatattgtcaaaggtaaaaaacctatatctgtttcatttgca
aaaaaactagaatatgcattgggggttgatgcaagcttctggataaatctccagtctaac
tatgaaaaggaattggcagattatgaggagttaaatgaaatatctagtgaagaaattaat
attctgcaaaaaataaaaaagctaacagattatgctaaagaaattggtctaattgcttct
gatatagaaggttcacttttagttattgaatggagaaagctattaaatataagcaagctg
actcatattagtgaaatctcacagttaggtgcttaccgtttatcatcctctgataatatt
gaggcagatattctatttacttggcttagaattattgatttaatcacaaaaagtcagcaa
ttagatgttgagttgaatattgagttattaaaagagaagcttcatttaatcagagccctt
acatttgaagatattgaaacaattcatatcaagttgaaagaatatctagctgaatgtggg
attaaatttgctatagtcaagcattttacaggagcacctgttcaaggtgtgattaagaaa
gatagtgatggtacactaagtcttataatgactttacgaagaaaatttgcagatgttttt
tggtttacttttttccatgaaattgggcatataataaatggtgacataaaagatcgtttg
attgattacgaaggagttgaaaatgaaaccgaaattaaagcagataaatttgcagcagat
tttttgatagatccgattatatacaaaaaacttgttaagtctggggatttttcgctttca
acaatcaaggaattatgtgaaaaaatgaaaataccgtcatttatcttaattggaagattg
cagcgagaaaagcatatagaatatcattgtttttcagatgaaaaagtcagatatgaactt
gatgagattgaaagaaggcaagtccaatcaaactgctgttaa

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