Acetivibrio saccincola: HVS_04245
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Entry
HVS_04245 CDS
T05223
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hsc
Acetivibrio saccincola
Pathway
hsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HVS_04245 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsc03400
]
HVS_04245 (recD2)
Enzymes [BR:
hsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HVS_04245 (recD2)
DNA repair and recombination proteins [BR:
hsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HVS_04245 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
PIF1
DEAD
Helicase_RecD
HHH_3
NPHP3_N
SLFN-g3_helicase
CbiA
AAA_28
SRP54
AAA_24
AAA
nSTAND3
AAA_22
HHH_2
ResIII
AAA_12
ATPase_2
DUF1995
TrwB_AAD_bind
Mg_chelatase
TraI_hel_assoc_N
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AUG56791
UniProt:
A0A2K9EJS8
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All DBs
Position
917252..919390
Genome browser
AA seq
712 aa
AA seq
DB search
MEYISGVVERITFANEENGFCVIKIKSKGFSDLVTVVGNLASVNVGSILKLKGQWKMDSK
YGRQFNAFDYREVVPATIAGIEKYLGSGLIKGIGPKYAKRIVRYFKEDTLRVIEEEPDKL
INVEGIGKKRLEMIKKAWQEQKEIKNVMLFLQSHGVSTGYAVKIYKTYGDESINVVRDNP
YRLADDIWGIGFKTADKIAQKLGFDKNSFERCRSGIAYVLNQLSNDGHCYATREQLISET
VKMLEIEENLVEGTLDKMIEDKLVIPDENNSIYLPPFYHSEAGTAKRIREIVNAKCPLAL
SDLDKIIDDIQKEYNIVYDKVQIDAIKAAAASKFMVLTGGPGTGKTTTTLAIIKIFQKMG
KTVLLAAPTGRAAKRMSETTGMEAKTIHRLLEYSPLEGYQKNAENKLQCDVLIIDETSMV
DIILMYNLLKAVKDETIVILVGDVDQLPSVGAGNVLKDIIDSGQVTFVRLTRIFRQALGS
AIITNAHLINKGIKPRLKCGKKSDFFFVEEEDPEKIPEVIKGLCTRRLPSYFNVDPVNDI
QVLTPMQRGVAGAHNLNVVLQEALNPSDVKIKYGGTVYCLNDKVMQIKNNYDKNVFNGDI
GIITHIDLEDKTLIISFDENDVEYDQTELDQVVLAYATTVHKSQGSEYQIVVAPFTTQHY
MMLQRNLLYTCVTRAKKAFVLVGTKKAVAIAVSNNKIQERNTMLSERLKIKE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggagtatataagtggggttgttgagagaattacatttgcaaatgaagaaaatggtttt
tgtgttataaaaataaagtctaaaggctttagtgacctggtaacagttgtgggaaacctt
gcttctgtcaatgtgggttcaattttaaagcttaaaggtcagtggaaaatggacagcaag
tacggcaggcagtttaatgcctttgactacagggaagttgttcctgcaactattgcaggg
attgaaaaatatttaggaagcgggcttataaaaggtattggtcctaaatatgcaaaaaga
attgtaagatattttaaagaagacaccctgcgtgttattgaagaagaaccggataaactt
attaatgttgaaggtataggtaaaaaacggctggagatgataaaaaaagcctggcaggaa
caaaaggaaataaaaaatgtcatgctttttttgcaaagccacggggtatctacaggatat
gccgtaaaaatttataaaacctatggggatgaaagtataaatgttgtccgggacaaccct
taccgcttagcagatgatatttggggcataggctttaagacggcggataaaattgcccag
aaactgggatttgataaaaattcatttgagcgctgcaggtcaggtatagcttatgtacta
aatcagctttccaatgacggccactgttatgcaacaagggagcagctaatatcagagacg
gtaaaaatgctggagatagaagaaaatttagttgaaggtactttggataaaatgatagag
gacaaattggtaatacctgatgaaaacaattctatttaccttccgcctttttaccatagt
gaagcgggaacggcaaagagaatacgggaaatagtaaatgctaaatgtccgttggctttg
tcagacttagataagataattgatgatatacaaaaagaatacaatatagtatacgacaag
gtgcaaatagatgcaatcaaggcggctgccgcttcaaagtttatggttttaacgggcggc
cccgggacgggaaaaaccacaacaacccttgcaataattaaaatatttcaaaagatggga
aagacggtgcttcttgcagcacctacagggcgggcggcaaagagaatgtcagagacaacc
ggtatggaggcaaagactatacaccggcttttagaatacagtccattggaaggatatcaa
aaaaatgcagaaaacaaattgcaatgtgatgtgttaataattgatgaaacttccatggta
gacataatattaatgtataatttattaaaggctgtaaaagatgagacaattgtcattttg
gtaggtgacgtggatcagcttccctctgttggggcgggcaacgttttaaaagacattatt
gattcgggtcaggtaacatttgtaagactcaccaggatattcaggcaggctttgggaagt
gcaataataaccaatgcccatcttataaacaaaggcattaagccaaggcttaaatgcggc
aaaaagagtgactttttctttgtagaagaggaagacccggaaaaaatacctgaagtaatt
aaaggactttgtacaagaaggcttccctcttattttaatgtggatcccgtaaatgatatc
caggtgctgacacctatgcaaaggggagtggcaggagcacataatttgaatgtggttttg
caggaagcgttaaatccgtcagatgttaaaattaaatacggcgggacggtatactgctta
aatgacaaagtgatgcagattaaaaacaattacgataaaaatgtttttaacggtgatata
ggaatcattacccatatagacttggaggacaaaacattaataataagctttgatgaaaat
gatgtggaatatgaccaaactgaacttgaccaggtggttttggcttatgccaccacagtt
cataaaagccagggaagtgaataccagattgtggttgcaccctttacaacccagcattat
atgatgcttcaaagaaatcttttatatacctgcgtcaccagggcaaagaaggcttttgta
ctggtggggactaaaaaggcggtggctatagctgtttcaaacaataaaattcaagagagg
aatacaatgctttcagaaagacttaaaatcaaagaatag
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