Acetivibrio saccincola: HVS_04885
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Entry
HVS_04885 CDS
T05223
Symbol
pelA
Name
(GenBank) Pectate trisaccharide-lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsc
Acetivibrio saccincola
Pathway
hsc00040
Pentose and glucuronate interconversions
hsc01100
Metabolic pathways
hsc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HVS_04885 (pelA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HVS_04885 (pelA)
Enzymes [BR:
hsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HVS_04885 (pelA)
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GFIT
Motif
Pfam:
Pectate_lyase_4
Dockerin_1
Beta_helix
Glyco_hydro_28
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-ProteinID:
AUG56910
UniProt:
A0A2K9EN66
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Position
1065714..1067003
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AA seq
429 aa
AA seq
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MLKSAKIISSVFVFFMLFSFIVKANPDGIYGDLNGDNIVDSRDITLLGRYILEIYEFDDK
QLKYADLNLDNRVDSIDYNIMKRYLLEIIKTLPVGEVTPTPTETPTPMPTQTPTPTQTPT
PTQTQTPTPTQTPTFPPVQSIADGFAEGTTGGEGGAVVTVKNASELRNAAGSSSKMVIIV
DGYIDLGSSELSVASNKTIQGKDSNSTIKGCISIKRVNNVIIRNLNITNPNGAGTGDGIE
ISGSTKVFVTKCTFYDCADGSLDIVRASDFVTVSWCRFRYINQREHNFVNLIGNSDSASN
DAGKLHVTMHHNWYDTGCDQRMPRVRFGKVHVYNNYFGCPGALYNIGVGVHSQILVENNY
FENQKNAWRNYSNNSSDQGKIHWNNGNVFINTAIPSWAPNSYVFTPPYAYSMDPGNNVKN
IVTAGAGNR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaagtgcaaaaattataagcagtgtatttgtcttttttatgcttttttcgttt
attgttaaggctaatcctgacggcatttatggtgatttaaacggggataatatagtggat
tcaagggatattacactattgggaagatatatacttgaaatttatgaatttgatgacaag
cagctaaaatatgcagatttaaaccttgataacagagtggattccattgactataatata
atgaaaagatacttattggaaattatcaaaactttacctgtcggggaagtaaccccaaca
ccaactgagacgccaacaccaatgccaacgcaaactccaactccaacacaaacaccaaca
ccaacacaaacacaaacaccaacacctacgcaaactccaacttttccgcctgtgcaaagc
attgctgacgggtttgcagaaggaacaacaggcggagaaggcggggctgtagttaccgtt
aaaaatgcatcagagcttagaaatgctgcaggttcatcatcaaaaatggttataattgtt
gatggctatatagatttaggttcctcagaacttagtgtagcttcaaataaaacaatacag
ggtaaagattcaaacagcaccattaaaggctgtatttcaattaaaagagttaacaatgta
attataagaaatctcaatataacaaatcctaatggtgcaggaacaggtgatggtatagaa
atttcaggaagtaccaaggtttttgtaactaaatgtactttttatgattgtgcagacggc
tctttagatatagtaagggcatcggattttgttaccgtttcctggtgcaggtttaggtac
atcaaccaaagagagcataattttgtaaaccttataggaaacagtgacagtgcttcaaat
gatgcaggaaagcttcatgtaaccatgcatcataattggtacgacaccggctgtgaccaa
agaatgcctagggttcgctttggaaaggtacatgtttacaataattactttggctgtccg
ggtgccctttacaatattggtgtaggtgttcacagccagatacttgttgaaaacaactat
tttgaaaatcaaaaaaatgcctggagaaattacagcaataacagcagtgatcaagggaaa
attcactggaataacggaaatgtatttataaataccgccattccttcgtgggctccaaat
tcctatgtttttactcccccatatgcttatagtatggatccgggcaataacgtaaaaaac
attgttactgccggtgcaggcaacaggtaa
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