Acetivibrio saccincola: HVS_06400
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Entry
HVS_06400 CDS
T05223
Symbol
spoVD2
Name
(GenBank) Stage V sporulation protein D
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hsc
Acetivibrio saccincola
Pathway
hsc00550
Peptidoglycan biosynthesis
hsc01100
Metabolic pathways
hsc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HVS_06400 (spoVD2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HVS_06400 (spoVD2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hsc01011
]
HVS_06400 (spoVD2)
Enzymes [BR:
hsc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HVS_06400 (spoVD2)
Peptidoglycan biosynthesis and degradation proteins [BR:
hsc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HVS_06400 (spoVD2)
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Ortholog
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AUG57206
UniProt:
A0A2K9E6U4
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All DBs
Position
complement(1421323..1422966)
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AA seq
547 aa
AA seq
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MIKKRLYILLFFFSVSIISLIIRFFYIQVQVGERLAVSATSQRISSLDIKSHRGNILDTN
SIPFTNRVNEVFVVIKPLNLKGNEKAIKIIANILNVNPGELKRLVDFKKEPIIYMTDNNT
KTILIKERLPGISFINSLKRHDNSGIAKHVTGYLNKADGIGQTGIEKSYDQVLNLNSKSS
IGMVTYPSDNFLAGLGYRFLNPVNYKKLHVKLTLNYHIQKIAENALDKRNLKGAVVIQNV
LNGDVVAMVSKPDFDPDKIDEYLDSPDKELFNRAVASYNLGSIFKTIVLASAYLDNKTPP
SNFYCPGYLMLGDKEFKCSSYASGGHGFVDVKKAFASSCNSYFIELGINTGIENILETAK
KFFTGINVQGIEESNGHLPQPGKYYTHGDIANISIGQGDILATPLQVSNIIATIANGGIK
NTVNIVDCIVDSDGNIVKKIKKEEGERILPKEICDNIKSYMEEVTISGTGTKANLDAYGG
AGGKTGSAETGQVIDGERVVHAWFAGYFPKANPKYSIVVFIEDGKSGGDVAAPVFKEIAK
EICEKNL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaaagactttatatactgcttttctttttttctgtttcaattatttctctt
attataagatttttttacatacaggtgcaagtgggtgaaagacttgctgtatcagccaca
agccaaaggatatcttctttagatattaaaagccacagaggcaacatattagatacaaac
tccatcccctttacaaacagggtaaatgaagtttttgttgtaattaagccccttaattta
aagggtaatgaaaaagcaattaaaataattgcaaatatacttaatgtaaatcccggtgaa
cttaaaagattagtggattttaaaaaagagcccattatttatatgactgacaacaatact
aaaactatcctcataaaggaaagacttcccggtatttcatttataaactcactaaagcgc
catgacaattccggcattgcaaagcatgtcacaggctatttaaataaagcagacggcatt
ggacagaccggaattgaaaaatcttatgaccaagttctaaaccttaactccaaaagttcc
ataggaatggtaacatacccaagtgataatttcctggcgggacttggatacaggttttta
aatcctgtaaattataaaaaacttcatgttaaacttacacttaactatcacatacaaaaa
atagcagaaaatgctttggataaaagaaatttaaaaggagcagttgtcattcaaaatgtg
ctaaacggcgatgttgtagccatggtaagcaaacctgattttgatcccgacaaaatagat
gagtatttagacagccctgataaggagctttttaaccgggcagttgcctcatacaatctg
ggctctatatttaaaactatagttcttgcaagtgcatacttggataacaaaacccctcct
tcaaatttttattgcccgggttatcttatgcttggggataaagagtttaaatgctcctca
tatgcatcaggaggccatggttttgtagatgttaaaaaagcctttgcctcttcctgcaac
tcttattttatagaactgggaataaacacaggcatagaaaatatacttgaaactgccaaa
aaattttttacaggcataaacgtacagggtattgaagaatctaatgggcatcttccccaa
cccggcaaatattatacccacggggatattgccaacatatccataggccagggtgatatt
cttgccaccccccttcaggtttcaaacatcatcgcaactatagcaaacggcggtataaaa
aacaccgttaacattgttgattgtattgttgattcagatggaaacattgtaaaaaaaata
aaaaaagaagagggggaaagaattctccctaaagaaatatgcgataatataaagtcttac
atggaggaagttactataagcggaacaggcaccaaagcaaatttagacgcctatggcggt
gccggtggaaaaaccggaagtgccgaaacaggtcaggttattgacggtgaaagagtggtt
catgcatggtttgcaggatattttcctaaagcaaatcctaaatactcaatagtggtattt
atagaagacggaaaaagcggcggagatgttgccgcccctgtgtttaaagaaattgcaaag
gaaatctgtgaaaaaaatctttaa
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