Acetivibrio saccincola: HVS_06680
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Entry
HVS_06680 CDS
T05223
Symbol
recQ2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hsc
Acetivibrio saccincola
Pathway
hsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HVS_06680 (recQ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsc03019
]
HVS_06680 (recQ2)
03400 DNA repair and recombination proteins [BR:
hsc03400
]
HVS_06680 (recQ2)
Enzymes [BR:
hsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HVS_06680 (recQ2)
Messenger RNA biogenesis [BR:
hsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HVS_06680 (recQ2)
DNA repair and recombination proteins [BR:
hsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HVS_06680 (recQ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
AUG57262
UniProt:
A0A2K9E0F5
LinkDB
All DBs
Position
1489944..1493168
Genome browser
AA seq
1074 aa
AA seq
DB search
MNLTEEALKIIMDLGDKNIFVIKTCDFSLYYSILDELKNNTLFYVPNTEIKYRSFKELYE
STDNLLIDYIYNLRTKSIILLYEQFIQIIEKIDFKIINSSIIVLNNNIERYKFLPINEEK
VINKIATTDINEIQDEEIDYMLEYYDDIRVDRYGDTQRVIIDYKDKNIFENLSVEEINLV
DTTRALSIQRKKYGDYVSDNSVEKCLIYLAQDLKIYINKEYYNRLQSDILLKEFYNSSYN
QVCVIANPEHFDSLPMYLNAWCRIFKNIILVEYDIDTNISYEQTYDIDLLLKKYWNSNKF
REYCIYDIYSNKYQVKKITQKEIIMQILSQYVKSKSGNSNEWKDIFFIASTGAGKSLLYQ
LPSIILNDENRITIVVSPLKALMKDQLQTMHEKGLTYATYINSDVSYSEQIERLEGIKNG
KYSLIYVSPEFLQKYSSAKYLVGDRKIGLVVVDEAHCVSTWGKDFRADYGYLGDYIKRYR
KEMQFPILALTATAVWGGEFDTLNEIIGYLNLMPAPIIYYTDIKRTNVDIEIKKVNVTGN
YRETKIKMTIDEITKIVKEGKKAIVYFPWKSQIKDIYIRLSEDIQSKVAIYTGDTKGEEG
EEIISKFKSGEYIVVLATKAFGMGIDISDIEIVYHHAIPGNLADYSQEIGRAGRNREIRG
KAYTLFNQKDFQYWRILKGISRPTQWELKLIVNKLYDEFKYGKKKRLQKLLPLDTFSFVF
NENEVDNTEQKIRTALFLIEKDFFKRFGWNIISVYPRDEFGNYYCTVDDGNKDEFINKYG
KYVREICNIEDNIRFSRDKYYLCKDIGNILEIDLKKLWEEKYYDKNYRSIKYLFFNNKLF
EDFSVIPRIYTKIELQSSKEKVLGQLEYALNIIATALQTQDKFTKNELEKSLRRVVRDDY
GLDDKEIINKLLHICTTFLYMEVGSNNYSHKMIIRKRDEGNEYIYIAPRLKISLGLQNII
KIFNNRFEDGEIFEKFLVPPYIGNSIYTCETLDLAYILETMGLASFIINGGHMQYVNIVV
NSVDKLATAYYKNQLLMDMRTRDDNEIKIVERFINTDKNKWDYIEDYFLGRLNI
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaactgaagaggctttaaaaataattatggatttgggtgataaaaatatattt
gtcataaaaacttgtgattttagtttatattatagtattctagatgaattaaaaaataac
acgttattttatgttcccaatacagaaattaaatacaggagttttaaagaactatatgaa
agtacagacaatttgttaatagattatatatataacttaaggacaaagagtattattttg
ttgtatgaacaatttattcagataattgaaaagattgatttcaaaataattaacagtagt
ataatagtgcttaataataatattgaacgctataaatttttgcctataaacgaagaaaaa
gttataaataaaattgctactacagatatcaacgaaatccaagatgaagaaatagattat
atgcttgaatattatgatgatataagagtcgacagatatggtgatacacaaagagttatt
atagattacaaagataaaaatatttttgaaaatttaagtgtagaggaaattaacttggta
gatacaacccgtgccttatctatacaacgtaaaaaatatggagattatgtgagtgataat
agtgtagaaaaatgcttaatttatttagcacaggatttaaaaatatatattaataaagag
tattataacagacttcaaagtgatatattattgaaggaattctataatagttcatataat
caagtttgcgtaattgcaaatcctgaacattttgattcgttacctatgtatcttaatgca
tggtgtagaatttttaaaaatattatactagtggaatatgatattgatactaatatatct
tatgaacaaacatatgatattgatttattattaaaaaaatattggaatagtaataaattc
cgagagtactgtatttatgatatttattcaaataagtatcaagtaaaaaaaattacacag
aaagaaattataatgcaaattctatcacaatatgtaaaatctaaaagcggcaatagtaat
gaatggaaagatattttttttattgcttcaactggagcaggtaagtcattgctatatcaa
ctaccttcaattattttaaatgatgaaaatagaattactattgtagtttctcctttaaaa
gcgttaatgaaagaccaattacagactatgcatgaaaaagggttaacttatgctacatat
ataaattcagatgtttcgtattcggaacagatagaaagacttgaaggaataaaaaatgga
aaatattccttgatatatgtgtctcctgaatttttacaaaagtattccagtgctaaatat
cttgttggtgatagaaaaataggattagtagttgtagatgaggctcattgtgttagtaca
tggggaaaagattttcgtgctgattatggatatttaggagattatataaaaagatacaga
aaagagatgcaatttccaattttagcattaacggcaactgcagtgtggggtggagaattt
gatacactaaatgaaataataggatatttaaaccttatgccagcccctatcatctattat
acagatattaaaagaacaaatgtagatatagaaataaaaaaagtaaatgttactgggaat
taccgtgaaaccaaaataaaaatgactattgatgaaatcactaagatagtaaaggaagga
aagaaagcaatagtatactttccgtggaaaagccaaattaaagatatttatattagactt
tcagaagatattcaatctaaagtagcaatttatactggtgacacaaagggagaagaaggt
gaagaaattatttcaaagtttaagtctggagaatatatagttgttcttgcaacgaaagcc
tttggcatgggtatagatatatctgatattgaaatagtatatcatcatgcgatacctgga
aatttggctgattattcccaagaaattggacgagcgggcaggaatcgagaaattagagga
aaagcctatactctatttaatcaaaaagattttcaatattggagaattcttaaaggaatt
tctcgtcctacacaatgggagttaaaacttatagttaataaattatatgatgagtttaaa
tatggtaagaaaaaacgtctacaaaagttattgcctttagatactttttcatttgttttt
aacgaaaatgaagtagataataccgagcaaaaaataaggacagcattatttttaatagaa
aaagatttttttaaaagatttggttggaatataattagcgtctacccaagagatgaattt
ggtaactattactgtacagtagatgacggtaataaagatgaatttataaataaatatgga
aaatatgttagagaaatttgcaatatagaagacaatattagattttcaagagataaatac
tatttgtgcaaagatattggtaatattctcgaaattgatttaaagaagttatgggaagag
aaatactatgataaaaactataggtctattaagtatctgttttttaacaataaactcttt
gaagatttttcggtcataccaaggatttatacaaaaatagaacttcagagttctaaagaa
aaggtactagggcaacttgaatatgcattgaatataattgcgacagcacttcaaacgcag
gataagtttacaaagaatgaattggaaaagtctctgagaagggtagtaagagatgattat
gggttagatgacaaggaaattatcaataaacttctacatatatgtactacttttctttac
atggaagttggaagtaataactattctcataagatgattatacgtaaaagagatgaaggc
aatgaatatatttatattgctccaagacttaaaatttcgttaggattacaaaacattatt
aagatatttaataataggttcgaagatggggaaatatttgaaaagtttttagttccacca
tatattggaaactctatttatacttgcgagacattggatttagcatatatactagaaact
atgggattagcaagttttattatcaatggtggtcatatgcaatatgttaacattgttgta
aactcggttgataagttagccacggcatactataaaaatcaattattgatggatatgcga
acaagggatgacaatgaaatcaagatagtcgaaagatttatcaatacagataagaataaa
tgggattatattgaagattactttttaggaagattaaatatataa
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