Acetivibrio saccincola: HVS_08540
Help
Entry
HVS_08540 CDS
T05223
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hsc
Acetivibrio saccincola
Pathway
hsc02024
Quorum sensing
hsc03060
Protein export
hsc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HVS_08540 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HVS_08540 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HVS_08540 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hsc02044
]
HVS_08540 (ffh)
Enzymes [BR:
hsc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HVS_08540 (ffh)
Secretion system [BR:
hsc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HVS_08540 (ffh)
Eukaryotic Sec-SRP protein
HVS_08540 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_30
AAA_31
AAA_22
Zeta_toxin
cobW
CLP1_P
ArlS_N
APS_kinase
Fer4_NifH
AAA_33
6PF2K
AAA_24
AAA_17
AAA_16
AAA_19
ABC_tran
ATP_bind_1
ResIII
Motif
Other DBs
NCBI-ProteinID:
AUG57616
UniProt:
A0A2K9E7U3
LinkDB
All DBs
Position
complement(1879594..1880982)
Genome browser
AA seq
462 aa
AA seq
DB search
MKVKDIENEVSYIMVFEGLSSKLQETIKKFRGKGRVTEKDVKQMMREIKLALLEADVNFK
VVKDFIDKVSERAVGQDVLESLTPGQQVIKIVNEEMIDLMGSSQSKVTFSSKPPTVYMMV
GLQGSGKTTTTGKLANLLRKQGKKPLLVACDVYRPAAIKQLQVVGGQLDIDVFAIENSKK
PVDIAKAAVEHAISNQFDLVIIDTAGRLHIDEELMNELENIKMAVMPQEILLVVDSMTGQ
DAVNVAKTFNEKLGIDGIILTKLDGDTRGGAALSVKAVTGKPIKFIGTGEKLNEIEPFFP
DRMASRILGMGDVLSLIEKAQEAFDEKKAMELEKKMRTQQFTLDDFLEQMQQIRKMGPLN
QLLGMIPGLNANALKNVEIDEKKMVHIEAIIQSMTKEERLNPSIINGSRRKRIARGSGTT
VQQVNRLLKDFENMKKMFKSMSEMTKFGKRGKKGFGKFRMPF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagttaaggatatcgaaaatgaggtgtcttatattatggtttttgaagggttatcc
agtaagcttcaggagactataaagaagtttaggggaaaaggaagagttacagaaaaagat
gtaaaacaaatgatgcgtgaaataaagcttgctcttttagaggctgacgttaactttaaa
gtggtaaaggactttattgacaaggtttctgaaagggctgttggtcaggatgttttagaa
agcctgactccaggacagcaggttataaaaatagtaaatgaagaaatgattgaccttatg
ggctcaagccagagtaaggtaactttttcttctaagccgccaactgtatatatgatggta
gggcttcagggttctggtaaaacaaccaccaccggaaagcttgccaatcttttaagaaaa
caggggaaaaaacccctactggtggcatgtgacgtttacagacctgcggctataaagcag
ctccaggttgttggaggccagcttgatattgatgtttttgcgatagaaaacagcaaaaaa
cctgttgatatagcaaaggcagctgttgaacatgccatttcaaaccagtttgatttagtc
ataatagatactgccggaaggcttcacatagatgaagagcttatgaatgagttagaaaac
ataaagatggcggtaatgccccaggaaatcctgcttgttgtagactctatgacaggtcag
gatgctgttaatgtggcaaaaacctttaatgaaaaattaggaatagatggaatcatactt
actaaacttgatggcgacacaagaggcggtgctgctctatctgtaaaagcagttaccgga
aagcctataaagtttataggtaccggggaaaaactaaatgaaatagaaccgtttttccct
gacaggatggcatctagaatccttgggatgggggatgttttaagtctcattgaaaaagcc
caggaagcgtttgatgagaaaaaggccatggaattagagaaaaaaatgcgcacacagcag
tttacattggatgatttcctagagcaaatgcagcagattagaaaaatgggacctttaaat
caattgttaggaatgattccgggtcttaacgccaatgcacttaaaaatgtagaaattgat
gaaaaaaagatggttcatattgaagctataatacagtcaatgaccaaagaggaaagatta
aacccatcaattataaacggcagcaggagaaagaggattgccaggggcagcggcactaca
gtacagcaggttaacaggcttttaaaagattttgaaaacatgaaaaaaatgttcaaatcc
atgtctgaaatgactaaatttggcaaacgtggcaaaaagggatttggaaaattccgaatg
ccattttaa
DBGET
integrated database retrieval system
