Acetivibrio saccincola: HVS_10610
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Entry
HVS_10610 CDS
T05223
Symbol
spoVD3
Name
(GenBank) Stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
hsc
Acetivibrio saccincola
Pathway
hsc00550
Peptidoglycan biosynthesis
hsc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HVS_10610 (spoVD3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hsc01011
]
HVS_10610 (spoVD3)
Peptidoglycan biosynthesis and degradation proteins [BR:
hsc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HVS_10610 (spoVD3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
RisS_PPD
Motif
Other DBs
NCBI-ProteinID:
AUG58017
UniProt:
A0A2K9E2N8
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All DBs
Position
complement(2318623..2320791)
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AA seq
722 aa
AA seq
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MNGATLMMKKRLLFLMVAFSLFILGLLFRVGWIQMVRGEELQEMAFQQQNSNREITPKRG
TIYDRNGNKLAVSSSAERIAVNPQDLPKDKKEREFIAENLALILEMDKEDVLEKMNKNNR
YQEIKRHVSKEVGNKVRQFRSENNIKGIYIDEDSKRVYPHNNLASHILGFVGYDNQGLDG
IERVMDKYLKGVPGKILSEVDARGRQTPFYEEKRIEPQDGLDVVLTIDKDIQYIATRELE
RAIDDNKVLKGGIVIVMDPRNGDILAMVSKPDYNPNNPRACPPGEDPETWDGTTSEDIEK
LQETVWRNRGLVDTYEPGSTFKAITVAAGLEEGIISLDDITNDSPIEVQGHTIRCWRTPP
HGEQTLREAVYNSCNPSFVRIGEKLGISTFYEYVRSFGFYDKTGVPLPYEGESNIHKNPT
LINMATTTFGQRFTITPVHLVNAYCAIANGGNLMRPRLVKELRDSEGNIVEKFEPEVIRQ
VISKETSSAMRELLEGVVSEGTGRNAYVRGYRVAGKTGTSETLEEGVYIASFAAFAPADN
PVISVLVALNHPTGHSYYGGQIAAPVAGRIIEDTLDYLNIERRYTEKDEQMMAEEVFVPD
IRDKTLNEAKLILREYGLDYRIEGDNSSGDIVVKEQTPKPGAVISKQSTVIVYTYKPETK
KMVKVPDLTNKTVEEATRTLRDMGLNIKINGIGSAISQSVEPGEEVQEGEIIAVDFIILD
TH
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtgaatggtgctacattaatgatgaagaagaggctattatttttaatggtagctttttct
ctttttatattggggcttttatttagagtgggttggattcaaatggttcggggggaagaa
cttcaggaaatggctttccagcagcaaaacagcaatagggaaataacccccaaaagaggg
actatttatgatagaaatggcaataaacttgcagttagttcaagtgctgaaaggatagct
gtaaacccccaggatttgccaaaagataaaaaagagcgggaattcattgcagaaaatctt
gctttgattttggaaatggataaagaagatgttttagagaagatgaataaaaacaacaga
taccaggagataaaaaggcatgtcagcaaagaggttggaaataaagttaggcagtttaga
agtgaaaataatataaaaggtatttatatagatgaagattctaaaagggtttatccccac
aataacctggcatcccatatattgggttttgtaggatatgacaaccaaggacttgacggt
atagaaagggtaatggataaatacttaaaaggggtaccgggaaagatactaagtgaagtg
gatgccaggggaaggcagacacctttttacgaggagaagcgcatcgaacctcaagacggt
ctggatgtggtactaaccatagataaagacatacagtatattgccacaagggaattggaa
agggcaatagatgataataaagtgctaaagggtggtatagttattgtaatggaccctaga
aacggggatatacttgctatggtttcaaagccggactataaccctaataaccccagggcg
tgcccgccaggtgaagatccggaaacatgggacggaaccaccagtgaagatattgaaaaa
cttcaggagactgtttggagaaacaggggattggttgacacttatgagccgggttccaca
tttaaagcaattacagtggcagcaggtcttgaagaggggattataagccttgatgatatt
acaaatgatagtcctattgaggtgcagggacatacaataaggtgctggagaactcccccc
catggggaacagactttaagggaagctgtgtataactcctgcaacccctcctttgtaagg
ataggggaaaagctaggtatttcaactttttatgagtatgtaagaagcttcgggttttat
gataagacaggagttccactgccctacgaaggggaaagtaatattcataaaaatcctact
ttgataaatatggcaactacaacctttggtcaaagatttacaataacacctgttcatttg
gttaatgcatattgtgccattgccaatgggggaaatcttatgagaccaaggcttgttaaa
gagctgagggacagtgaagggaatatagtggaaaaatttgagcctgaagttataagacag
gttatttccaaagaaacttccagtgcaatgagggaacttttagaaggtgttgtttcagaa
ggtaccggaagaaacgcctatgtaaggggctacagggttgccgggaaaacaggaacttca
gaaactcttgaagaaggggtttatatagcgtcctttgcagcatttgcaccggcagataat
ccggttatatctgttttggttgcactaaaccatcctacaggtcattcctattatggaggt
cagatagctgctcctgtggcaggaagaattatagaggatactttggactacttaaatata
gagagaagatatacagaaaaagatgagcaaatgatggcagaggaagtatttgtaccggac
atcagggataaaactttaaatgaagcaaagctgatactcagggaatatggtttagattac
aggattgaaggggacaacagcagcggagacattgtggtaaaagagcagactccaaagcct
ggagctgttatatcaaagcagtcaacggttatagtttatacttacaaacctgaaaccaaa
aaaatggtgaaggtgcctgacctgaccaacaaaactgtagaagaggccacaaggacatta
agagatatggggcttaatataaaaataaacggaattggttctgccataagccagagtgtt
gaacctggagaagaggtacaggaaggtgaaataatagcagttgatttcataattcttgat
acccactaa
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