Acetivibrio saccincola: HVS_11555
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Entry
HVS_11555 CDS
T05223
Symbol
recJ2
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hsc
Acetivibrio saccincola
Pathway
hsc03410
Base excision repair
hsc03430
Mismatch repair
hsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HVS_11555 (recJ2)
03430 Mismatch repair
HVS_11555 (recJ2)
03440 Homologous recombination
HVS_11555 (recJ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsc03400
]
HVS_11555 (recJ2)
DNA repair and recombination proteins [BR:
hsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HVS_11555 (recJ2)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HVS_11555 (recJ2)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HVS_11555 (recJ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Troponin
Motif
Other DBs
NCBI-ProteinID:
AUG58202
UniProt:
A0A2K9E384
LinkDB
All DBs
Position
complement(2538316..2540610)
Genome browser
AA seq
764 aa
AA seq
DB search
MDVKINILNERVKIPIELIEACGGDELIARIFYNRGYKDPDTVKIMLNDEYYKPTLPDEF
PGMEKAVRRILKAIDSKELICIYGDYDVDGVTSTVTLVECLRNYTDSVIYHVPDRFTEGY
GMNEEVVRSLYEKGVSLIITCDCGISNVNEISLAKELKMDVILTDHHSIPDETPDAYVIL
NPKLLEEGHRARNISGCAMAYFLCLAVLKEKGEEYIGDGFLDLLALSLIADVVSLNGENR
YLLKKSLPALINTKRAGLSELFKIAGKNGSIDNEEDIAFQIAPRINAAGRMDTAKLPVEL
LLCKEQDLAREMAEKIDVLNSERKRIQQKIIDEAIEMVETQKKNKTVLVLYGEFWHHGII
GIAAGRICQLYKKPAILLSIKDDGSTVVGSARSIEEINIYELIKECSGKLLKFGGHSQAA
GLSLKKENLEDFVREIETAAEKRYFIKDTIIANVDMELSFNEISDDFITRIQSAGPYGEG
FRFPEFYSSNIRVVSDRKTEKNHHIMVLEDENKIRIPAVKWFGDEESLEGKVFDITYKVG
TNTYRGNNSIQLTIGHMVENLSVKKILFEGNIIDERKTAINTLLLKYKDAQIFYEGLKSR
CPIDDTVNRFNIKPKKDIVFISPPANTAVFREVIALADPENIIINFTLSPDYLFKGFLMN
FLGVIKYTIKNKGGREYIEVFSQKLCVEEGIIKASLKYLKAKGFINYILSEDHSKVFIFQ
GSGKERKTNIAFLEKSLKNALMEKNAYKEFILKMDKEKFKEYLK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
gtggatgttaagataaatatattaaatgaaagggtcaaaattcccatagagcttatagaa
gcctgcgggggagatgagcttattgcaaggatattttataacagaggatataaagatcct
gataccgttaaaataatgctaaatgatgaatactataagcctaccctgccggatgagttt
ccgggcatggaaaaggcggtaagaaggattttaaaggcgatagattccaaagaactgatt
tgtatttacggggactatgatgtggacggtgttacaagtaccgttacccttgtggaatgt
cttagaaactacacagattcggtaatttaccatgtcccggacaggtttaccgaagggtac
ggaatgaatgaggaagttgtaagaagcctttatgaaaaaggggtatcccttataataacc
tgtgactgcggtatttccaatgtaaatgagataagtttggcaaaagagcttaaaatggat
gttatactaactgaccaccacagtattcctgatgaaactcccgatgcatatgttatatta
aatcccaaacttttagaagaaggacacagggcaagaaatatttcaggctgtgccatggca
tattttttgtgcttggctgttttaaaagaaaagggagaagaatatatcggggatggattt
ttagaccttttggcactgtcacttattgcagatgtggtaagtcttaacggtgaaaacaga
taccttttaaaaaagtcgctgccggctttgattaatacaaaaagggcaggtcttagtgag
ctttttaaaatagccggcaaaaacggcagtatagacaatgaagaggatattgcatttcaa
attgcaccaagaataaatgcagcaggaagaatggataccgccaaattgcctgttgagctg
cttttgtgtaaggagcaggatttggcaagagaaatggcagaaaaaattgatgttttaaat
agtgaaagaaaaagaatccagcagaaaataattgatgaagcaatagaaatggtggaaaca
cagaaaaagaacaagacggttttggtgctttatggggagttctggcatcatggaataatc
ggaatagcagcagggagaatttgtcagctgtataaaaaacctgcaatactgctttcaatt
aaagatgacggaagtacagtggtgggttcagccaggtcaatagaagaaataaatatatat
gagcttataaaagagtgcagcgggaagcttttaaaatttggcggacactcccaggcagca
ggtctttcattaaagaaagaaaaccttgaggattttgtaagggaaattgaaacagcggca
gaaaaaagatactttataaaggatacaataatagcaaatgtggatatggagctttccttt
aatgaaatatcagatgattttattacaaggattcaaagtgcaggtccttatggggaaggc
tttaggtttcctgagttttattcttcaaatataagggttgtaagtgacagaaagactgaa
aaaaatcatcatattatggttttagaagatgaaaacaaaataagaataccggcggttaag
tggtttggagatgaggagtctttagagggaaaggtttttgacattacttataaagtgggg
acaaatacctatagaggaaataacagcattcagcttacaataggccatatggttgaaaat
ttaagtgtaaaaaagatactttttgaaggaaatattatagatgagagaaagacagccata
aatacccttttactaaagtataaagatgcacaaattttttatgaaggtctaaaatcccgc
tgccctatagacgatacagtaaacaggtttaatataaagcccaaaaaagatattgttttt
atttcacccccggcaaacacggcagtattcagggaagttatagctttagccgacccggaa
aatataattatcaattttaccctttcgccggattatttgtttaaaggatttttaatgaat
tttttaggagtaataaaatatactattaaaaacaagggtggcagggaatacattgaggtt
ttttcccagaaactttgtgtggaggagggtattataaaagccagccttaaatatcttaag
gcaaagggttttataaattatatattaagtgaagaccacagcaaagtatttatatttcaa
ggcagtgggaaagagagaaaaacaaatattgcttttctagaaaaaagcctgaaaaacgcc
cttatggaaaagaatgcatacaaagaatttatattaaaaatggataaagaaaaatttaaa
gaatacttaaaataa
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