KEGG   Acetivibrio saccincola: HVS_11555
Entry
HVS_11555         CDS       T05223                                 
Symbol
recJ2
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hsc  Acetivibrio saccincola
Pathway
hsc03410  Base excision repair
hsc03430  Mismatch repair
hsc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hsc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HVS_11555 (recJ2)
   03430 Mismatch repair
    HVS_11555 (recJ2)
   03440 Homologous recombination
    HVS_11555 (recJ2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsc03400]
    HVS_11555 (recJ2)
DNA repair and recombination proteins [BR:hsc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     HVS_11555 (recJ2)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     HVS_11555 (recJ2)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      HVS_11555 (recJ2)
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB Troponin
Other DBs
NCBI-ProteinID: AUG58202
UniProt: A0A2K9E384
LinkDB
Position
complement(2538316..2540610)
AA seq 764 aa
MDVKINILNERVKIPIELIEACGGDELIARIFYNRGYKDPDTVKIMLNDEYYKPTLPDEF
PGMEKAVRRILKAIDSKELICIYGDYDVDGVTSTVTLVECLRNYTDSVIYHVPDRFTEGY
GMNEEVVRSLYEKGVSLIITCDCGISNVNEISLAKELKMDVILTDHHSIPDETPDAYVIL
NPKLLEEGHRARNISGCAMAYFLCLAVLKEKGEEYIGDGFLDLLALSLIADVVSLNGENR
YLLKKSLPALINTKRAGLSELFKIAGKNGSIDNEEDIAFQIAPRINAAGRMDTAKLPVEL
LLCKEQDLAREMAEKIDVLNSERKRIQQKIIDEAIEMVETQKKNKTVLVLYGEFWHHGII
GIAAGRICQLYKKPAILLSIKDDGSTVVGSARSIEEINIYELIKECSGKLLKFGGHSQAA
GLSLKKENLEDFVREIETAAEKRYFIKDTIIANVDMELSFNEISDDFITRIQSAGPYGEG
FRFPEFYSSNIRVVSDRKTEKNHHIMVLEDENKIRIPAVKWFGDEESLEGKVFDITYKVG
TNTYRGNNSIQLTIGHMVENLSVKKILFEGNIIDERKTAINTLLLKYKDAQIFYEGLKSR
CPIDDTVNRFNIKPKKDIVFISPPANTAVFREVIALADPENIIINFTLSPDYLFKGFLMN
FLGVIKYTIKNKGGREYIEVFSQKLCVEEGIIKASLKYLKAKGFINYILSEDHSKVFIFQ
GSGKERKTNIAFLEKSLKNALMEKNAYKEFILKMDKEKFKEYLK
NT seq 2295 nt   +upstreamnt  +downstreamnt
gtggatgttaagataaatatattaaatgaaagggtcaaaattcccatagagcttatagaa
gcctgcgggggagatgagcttattgcaaggatattttataacagaggatataaagatcct
gataccgttaaaataatgctaaatgatgaatactataagcctaccctgccggatgagttt
ccgggcatggaaaaggcggtaagaaggattttaaaggcgatagattccaaagaactgatt
tgtatttacggggactatgatgtggacggtgttacaagtaccgttacccttgtggaatgt
cttagaaactacacagattcggtaatttaccatgtcccggacaggtttaccgaagggtac
ggaatgaatgaggaagttgtaagaagcctttatgaaaaaggggtatcccttataataacc
tgtgactgcggtatttccaatgtaaatgagataagtttggcaaaagagcttaaaatggat
gttatactaactgaccaccacagtattcctgatgaaactcccgatgcatatgttatatta
aatcccaaacttttagaagaaggacacagggcaagaaatatttcaggctgtgccatggca
tattttttgtgcttggctgttttaaaagaaaagggagaagaatatatcggggatggattt
ttagaccttttggcactgtcacttattgcagatgtggtaagtcttaacggtgaaaacaga
taccttttaaaaaagtcgctgccggctttgattaatacaaaaagggcaggtcttagtgag
ctttttaaaatagccggcaaaaacggcagtatagacaatgaagaggatattgcatttcaa
attgcaccaagaataaatgcagcaggaagaatggataccgccaaattgcctgttgagctg
cttttgtgtaaggagcaggatttggcaagagaaatggcagaaaaaattgatgttttaaat
agtgaaagaaaaagaatccagcagaaaataattgatgaagcaatagaaatggtggaaaca
cagaaaaagaacaagacggttttggtgctttatggggagttctggcatcatggaataatc
ggaatagcagcagggagaatttgtcagctgtataaaaaacctgcaatactgctttcaatt
aaagatgacggaagtacagtggtgggttcagccaggtcaatagaagaaataaatatatat
gagcttataaaagagtgcagcgggaagcttttaaaatttggcggacactcccaggcagca
ggtctttcattaaagaaagaaaaccttgaggattttgtaagggaaattgaaacagcggca
gaaaaaagatactttataaaggatacaataatagcaaatgtggatatggagctttccttt
aatgaaatatcagatgattttattacaaggattcaaagtgcaggtccttatggggaaggc
tttaggtttcctgagttttattcttcaaatataagggttgtaagtgacagaaagactgaa
aaaaatcatcatattatggttttagaagatgaaaacaaaataagaataccggcggttaag
tggtttggagatgaggagtctttagagggaaaggtttttgacattacttataaagtgggg
acaaatacctatagaggaaataacagcattcagcttacaataggccatatggttgaaaat
ttaagtgtaaaaaagatactttttgaaggaaatattatagatgagagaaagacagccata
aatacccttttactaaagtataaagatgcacaaattttttatgaaggtctaaaatcccgc
tgccctatagacgatacagtaaacaggtttaatataaagcccaaaaaagatattgttttt
atttcacccccggcaaacacggcagtattcagggaagttatagctttagccgacccggaa
aatataattatcaattttaccctttcgccggattatttgtttaaaggatttttaatgaat
tttttaggagtaataaaatatactattaaaaacaagggtggcagggaatacattgaggtt
ttttcccagaaactttgtgtggaggagggtattataaaagccagccttaaatatcttaag
gcaaagggttttataaattatatattaagtgaagaccacagcaaagtatttatatttcaa
ggcagtgggaaagagagaaaaacaaatattgcttttctagaaaaaagcctgaaaaacgcc
cttatggaaaagaatgcatacaaagaatttatattaaaaatggataaagaaaaatttaaa
gaatacttaaaataa

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